BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19941 (UTR included)
(1948 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1E03 1360 0.0
BF01041B2G06 297 3e-80
>BF01023B1E03
Length = 752
Score = 1360 bits (686), Expect = 0.0
Identities = 730/746 (97%), Gaps = 1/746 (0%)
Strand = Plus / Plus
Query: 467 atacattaatgaaaaatatcgagcatacttgatcatgggtctatgtaaatgtccaaaaag 526
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8 atacattaatgaaaaatatcgagcacacttgatcatgggtctatgtaaatgtccaaaaag 67
Query: 527 aagagttacaaatcagttttgttttgaacacagagtaaatgtttgtgaatattgtatggt 586
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aagagttaccaatcagttttgttttgaacacagagtaaatgtttgtgaatattgtatggt 127
Query: 587 tacaagccatccaaagtgtataatacaatcatatttgcaatggttacaagacagcgacta 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tacaagccatccaaagtgtataatacaatcatatttgcaatggttacaagacagcgacta 187
Query: 647 caatcccatatgtgaaatatgcactaaaacattatccgaaggcgagtgtattcgacttac 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 caatcccatatgtgaaatatgcactaaaacattatccgaaggcgagtgtattcgacttac 247
Query: 707 atgttaccatgtttttcactgggagtgtgcagaaactcgatttagagccctgccccgtac 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atgttaccatgtttttcactgggagtgtgcagaaactcgatttagagccctgccccgtac 307
Query: 767 tacagcacctgcggggtaccagtgtccgtcttgtgccaccccagtattcccaccttcaaa 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tacagcacctgcggggtaccagtgtccgtcttgtgccaccccagtattcccaccttcaaa 367
Query: 827 ccttgtgtcaccagtagctgatgttctcagagaaaagcttgctggtgtcaattgggccag 886
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 368 ccttgtgtcaccagtagctgatgttctcagagaaaagctggctggtgtcaattgggctag 427
Query: 887 ggctggtcttggactaccattgctttcagaggaccaagacatgaaaggcgcagctggtag 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggctggtcttggactaccattgctttcagaggaccaagacatgaaaggcgcagctggtag 487
Query: 947 acgtagccagtccccaaatcagagccagttcttcaactctctagacagtcaaagaggcgc 1006
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 acgtagccagtctccaaatcagagccagttcttcaactctctagacagtcaaagaggcgc 547
Query: 1007 tcctgccggggctagtgatgatgagtgtaataatagatctacaacaagtactccacattc 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcctgccggggctagtgatgatgagtgtaataatagatctacaacaagtactccacattc 607
Query: 1067 cattgtacaaataccagatgatccagtcaatatttatgatggcacatcagttaaacgaaa 1126
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 608 cattgt-cnnataccagatgatccagtcaatatttatgatggcacatcagttaaacgtaa 666
Query: 1127 cgatggtttattaggaaatcagaccgcaagaaaaggtttcaagtctttggatcaatcaaa 1186
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 667 cgatggtttattaggaaatcagaccgcaannnnnngtttcaagtctttggatcaatcaaa 726
Query: 1187 caaattgatgaatttcgatcacgatg 1212
||||||||||||||| ||||||||||
Sbjct: 727 caaattgatgaattttgatcacgatg 752
>BF01041B2G06
Length = 776
Score = 297 bits (150), Expect = 3e-80
Identities = 165/170 (97%)
Strand = Plus / Minus
Query: 1779 actgcatacaaagctcttgattggggacttctcgctattccaagagggggttctttggca 1838
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 776 actgcatacaaagctcttgattgaggacttctcgctattccaagagggggttctttggcg 717
Query: 1839 gtagcacatgtaaacaattcagacagcatattaaatatagaccgctctacttcatcccat 1898
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gtagaacatgtaaacaattcagacagcatattaaatatagaccgctctacttcatcccat 657
Query: 1899 tcgtaatctgggtactggttagaccaggcatttttaaaatcttcacataa 1948
||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 656 tcgtaatctggatactggttagaccaggcatttttaaaatcctcacataa 607
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,001
Number of extensions: 5896
Number of successful extensions: 5896
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5894
Number of HSP's successfully gapped: 2
Length of query: 1948
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1931
Effective length of database: 8,119,229
Effective search space: 15678231199
Effective search space used: 15678231199
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)