BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN19943 (UTR included)
         (3514 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01016B1C11                                                          345   3e-94

>BF01016B1C11
          Length = 792

 Score =   bits (174), Expect = 3e-94
 Identities = 180/182 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctttgatcaaataaactatgtactaaggaatgttttgcaatatagtaattttaataaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 182 ttctttgatcaaataaactatgtactaaggaatgttttgcaatatagtaattataataaa 123

                                                                       
Query: 61  accattaaactaaaaatattgttgaaacattacactaaaaatattatttaataatcacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 122 accattaaactaaaaatattgttgaaacattacactaaaaatattatttaacaatcacaa 63

                                                                       
Query: 121 aatgctatttgtttgatatttaaactaaattctagtattattttttctaattttagccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  aatgctatttgtttgatatttaaactaaattctagtattattttttctaattttagccat 3

             
Query: 181 tt 182
           ||
Sbjct: 2   tt 1


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 476,846
Number of extensions: 11548
Number of successful extensions: 11548
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11546
Number of HSP's successfully gapped: 1
Length of query: 3514
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3496
Effective length of database: 8,109,745
Effective search space: 28351668520
Effective search space used: 28351668520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)