BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19960 (UTR included)
(1603 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 232 1e-60
BF01052B1H02 198 2e-50
BF01056B1D02 186 7e-47
BF01010B2F09 153 1e-36
BF01029B2F12 139 2e-32
BF01031B1E12 129 1e-29
BF01062A1B01 119 1e-26
BF01037B1H08 113 9e-25
BF01040A1G09 88 5e-17
BF01062A1A05 68 5e-11
>BF01023A2A12
Length = 723
Score = 232 bits (117), Expect = 1e-60
Identities = 172/189 (91%), Gaps = 1/189 (0%)
Strand = Plus / Minus
Query: 1 catggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaa 60
||||||||||||||||||||||||||||| ||| ||||||||| |||||| |||||||||
Sbjct: 293 catggagaaggttagagcattaatcaccacgctcgctcaaggctgattggtgatttcaaa 234
Query: 61 cttataatttcaaattataagtccaggtttcctcacgatgtttcccttcaccgtccgtca 120
|||||||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct: 233 cttataatttgaaattataagaccaggtttcctcacgacgttctccttcaccgtccgtca 174
Query: 121 gtgatgtctaaatactcttagaaagtacatatgattaggaaaa-actacattggtacttg 179
||| |||||||||||| ||||||||||||| ||| | |||||| | |||||||||||||
Sbjct: 173 gtggtgtctaaatactgttagaaagtacatgtgactcggaaaagatcacattggtacttg 114
Query: 180 ccaggtttc 188
|||||||||
Sbjct: 113 ccaggtttc 105
>BF01052B1H02
Length = 790
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 1 catggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaa 60
||||||||| ||||||||||||| ||||| ||||||||||| ||| ||||||||||||||
Sbjct: 318 catggagaaagttagagcattaagcaccacgcttgctcaagacgggttggcgatttcaaa 377
Query: 61 cttataatttcaaattataagtccaggtttcctcacgatgtttcccttcaccgtccgtca 120
|| || ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 378 ctaattatttcaaattataagaccaggtttcctcacgatgttttccttcaccgtccgtca 437
Query: 121 gtgatgtctaaatactcttagaaagtacatat 152
|| |||||||||||||||| ||||| |||||
Sbjct: 438 gtagtgtctaaatactcttaaaaagtgcatat 469
>BF01056B1D02
Length = 778
Score = 186 bits (94), Expect = 7e-47
Identities = 162/183 (88%), Gaps = 5/183 (2%)
Strand = Plus / Minus
Query: 7 gaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaacttata 66
||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||| ||||||
Sbjct: 688 gaaggttagagcattaaccaccacgcttgctcaagacgggttggcgatttcaatcttata 629
Query: 67 atttcaaattataagtccaggtttcctcacgatgtttcccttcaccgtccgtcagtgatg 126
|||| |||||||||| |||||||||||||||| |||| ||||||| |||||||| ||
Sbjct: 628 atttgaaattataagaccaggtttcctcacgacgttttccttcac----cgtcagtggtg 573
Query: 127 tctaaatactcttagaaagtacatatgattaggaaaa-actacattggtacttgccaggt 185
||||| ||| |||||||||||||||||| | |||||| | |||||||||||||||||||
Sbjct: 572 tctaactacccttagaaagtacatatgactcggaaaagatcacattggtacttgccaggt 513
Query: 186 ttc 188
|||
Sbjct: 512 ttc 510
>BF01010B2F09
Length = 764
Score = 153 bits (77), Expect = 1e-36
Identities = 171/198 (86%), Gaps = 7/198 (3%)
Strand = Plus / Plus
Query: 1 catggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaa 60
||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||
Sbjct: 311 catggagaaggttagagcattaatcaccacgctcgctcaagacggattggcgattttaat 370
Query: 61 cttataatttcaaattataagtccaggtttcctcacgatgtttcccttcaccgtccgtca 120
||||||||| |||| || ||||||||||||| || || ||||||||||||||||
Sbjct: 371 tttataattt-ttattacaaatccaggtttcctc---atattctccttcaccgtccgtca 426
Query: 121 gtgatgtctaaatactcttagaaagtacatatgatt--aggaaaaactacattggtactt 178
||| ||||||||||||||||||||||||||||| | | ||| | | ||||||||||||
Sbjct: 427 gtggcgtctaaatactcttagaaagtacatatgactcgatgaagatc-acattggtactt 485
Query: 179 gccaggtttcgaacccgc 196
| ||||||||||||||||
Sbjct: 486 gtcaggtttcgaacccgc 503
>BF01029B2F12
Length = 749
Score = 139 bits (70), Expect = 2e-32
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 75 ttataagtccaggtttcctcacgatgtttcccttcaccgtccgtcagtgatgtctaaata 134
||||||| |||||||||||| |||||| | ||||||||||||||||||| ||||||||||
Sbjct: 543 ttataagaccaggtttcctcgcgatgtcttccttcaccgtccgtcagtggtgtctaaata 602
Query: 135 ctcttagaaagtacatatgattaggaaaaactacattggtacttgccaggtttcgaaccc 194
||||||||||||||||||| | | ||| ||||||||||||||||||||||||||||
Sbjct: 603 ctcttagaaagtacatatgtctctcataaatcacattggtacttgccaggtttcgaaccc 662
Query: 195 gc 196
||
Sbjct: 663 gc 664
>BF01031B1E12
Length = 730
Score = 129 bits (65), Expect = 1e-29
Identities = 102/113 (90%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 4 ggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaactt 63
|||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||
Sbjct: 164 ggagaaggttagagcattaatcaccacgcttgctcaagacgggttggcgatttcaatctt 105
Query: 64 ataattt-caaattataagtccaggtttcctcacgatgtttcccttcaccgtc 115
||| ||| | ||| ||||| ||||||||||||||||||||| || ||||||||
Sbjct: 104 atactttgctaatcataagaccaggtttcctcacgatgttttccctcaccgtc 52
>BF01062A1B01
Length = 807
Score = 119 bits (60), Expect = 1e-26
Identities = 99/111 (89%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 1 catggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaa 60
||||||||||||||| |||| | |||| ||| ||||||||||||||||||||| ||||
Sbjct: 122 catggagaaggttag--cattgaccaccgagctcgctcaaggcggattggcgattccaaa 179
Query: 61 cttataatttcaaattataagtccaggtttcctcacgatgtttcccttcac 111
||| |||||| |||||| |||||||||||||||| ||||||||||||||||
Sbjct: 180 cttctaattttaaattacaagtccaggtttcctcgcgatgtttcccttcac 230
>BF01037B1H08
Length = 758
Score = 113 bits (57), Expect = 9e-25
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 93 tcacgatgtttcccttcaccgtccgtcagtgatgtctaaatactcttagaaagtacatat 152
||||||||||| | |||||||||||||||| || ||||||| |||||||||||||||||
Sbjct: 222 tcacgatgttttcactcaccgtccgtcagtggtgactaaatattcttagaaagtacatat 163
Query: 153 gattaggaaaa-actacattggtacttgccaggtttcgaacccgc 196
|| | |||||| | ||||||||||||||||||||||||||||||
Sbjct: 162 gactcggaaaagatcacattggtacttgccaggtttcgaacccgc 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 1 catggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaa 59
|||| |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||
Sbjct: 297 catgtagaaggttagagcattaagcaccacgcttgctcaagacggggtggcgatttcaa 239
>BF01040A1G09
Length = 753
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 1 catggagaaggttagagcattaatcaccatgcttgctcaaggcggattggcgatttcaaa 60
||||||||||||| |||||||||| ||| ||||||||||| || ||||||||||||||
Sbjct: 85 catggagaaggtttaagcattaatcgccacgcttgctcaagatgggttggcgatttcaaa 26
Query: 61 cttataatttcaaatt 76
|||||||||| |||||
Sbjct: 25 cttataatttgaaatt 10
>BF01062A1A05
Length = 777
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 4 ggagaaggttagagcattaatcaccatgcttgctcaag 41
|||||||||||||||||||||||||| |||||||||||
Sbjct: 551 ggagaaggttagagcattaatcaccacgcttgctcaag 514
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,943
Number of extensions: 6223
Number of successful extensions: 6223
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 6216
Number of HSP's successfully gapped: 12
Length of query: 1603
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1586
Effective length of database: 8,119,229
Effective search space: 12877097194
Effective search space used: 12877097194
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)