BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19970 (UTR included)
(740 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016A2C11 416 e-116
>BF01016A2C11
Length = 780
Score = 416 bits (210), Expect = e-116
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 512 gtccccgtcggagcgacgtttacagaaagagcttatgtcgttgatgaaggaacctccacc 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtccccgtcggagcgacgtttacagaaagagcttatgtcgttgatgaaggaacctccacc 68
Query: 572 aggtgtcacggttgacggagaccaggccagccaaaatctgacactgtggacagttcacat 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 aggtgtcacggttgacggagaccaggccagccaaaatctgacactgtggacagttcacat 128
Query: 632 ggaaggtgtccccggaacactttacgagggtgaaaaatttgtattgcagtttaaattcac 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ggaaggtgtccccggaacactttacgagggtgaaaaatttgtattgcagtttaaattcac 188
Query: 692 taataaatatcccttcgattcgcctgaggt 721
||||||||||||||||||||||||||||||
Sbjct: 189 taataaatatcccttcgattcgcctgaggt 218
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,436
Number of extensions: 2158
Number of successful extensions: 2158
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2158
Number of HSP's successfully gapped: 1
Length of query: 740
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 724
Effective length of database: 8,128,713
Effective search space: 5885188212
Effective search space used: 5885188212
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)