BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19972 (UTR included)
(1255 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 163 8e-40
BF14_335_C2 131 3e-30
BF14_335_C5 127 5e-29
BF01019A1H08 125 2e-28
BF01049B1F01 119 1e-26
BF01016B1E06 107 4e-23
BF01021A2B11 92 3e-18
BF01017A1F03 88 4e-17
BF01043B1E03 86 2e-16
BF01044B1A07 80 1e-14
BF01056B2D01 72 2e-12
BF01014B2F02 72 2e-12
>BF14_335_C4
Length = 1491
Score = 163 bits (82), Expect = 8e-40
Identities = 155/178 (87%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 553 aggtagagagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatc 612
||||||||||||||||||||| || |||||||||||| || |||||| ||||| | |
Sbjct: 1190 aggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaaggcc 1249
Query: 613 cctttaacctacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaac 672
|||| ||||||||||||||||||||| ||||| ||||||| |||||| ||| ||||||||
Sbjct: 1250 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaac 1308
Query: 673 acgatgttcccggcacccgcacggtgaaaccatggaatgctgagaggttttgtctcat 730
||||| |||| ||| |||||||||||| ||||||||||||||||| ||| |||||||
Sbjct: 1309 gcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctcat 1366
>BF14_335_C2
Length = 1827
Score = 131 bits (66), Expect = 3e-30
Identities = 148/173 (85%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 558 gagagaggagcttggacggtggaggtgagcgt--tcaacgcgcgttagatagggatccct 615
|||||||||||||||||||||||||||||||| | ||||| ||||||||||| | ||
Sbjct: 979 gagagaggagcttggacggtggaggtgagcgttatgtacgcgagttagataggg-gctct 921
Query: 616 ttaacctacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaacacg 675
| |||||||||||| ||||||| ||||| ||||||| |||||| |||||||||||| ||
Sbjct: 920 taaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcg 861
Query: 676 atgttcccggcacccgcacggtgaaaccatggaatgctgagaggttttgtctc 728
| |||||||||||||||||||| |||| ||| ||| |||||||| |||||
Sbjct: 860 gcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctc 808
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 479 aattttaaagcgcgttgtgataatggagcttacggttctttgggaaaccaacatccccaa 538
|||||||||||||| | | |||| |||| |||||||| |||| | ||||||||||||||
Sbjct: 1258 aattttaaagcgcgctacgctaatagagcctacggttccttggaagaccaacatccccaa 1199
Query: 539 agaccatgctatcaaggt 556
| ||||||| ||||||||
Sbjct: 1198 aaaccatgccatcaaggt 1181
>BF14_335_C5
Length = 1597
Score = 127 bits (64), Expect = 5e-29
Identities = 134/158 (84%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 553 aggtagagagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatc 612
|||||||||||||||||||||||||||||||||||||| || |||||||||| ||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 613 cctttaacctacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaac 672
|||| ||||||||| ||||||| ||||| ||||||| |||||| ||||| ||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgca-- 1555
Query: 673 acgatgttcccggcacccgcacggtgaaaccatggaat 710
| |||| |||||||||||||||||||| ||| |||||
Sbjct: 1556 aagatgcacccggcacccgcacggtgaatccacggaat 1593
>BF01019A1H08
Length = 504
Score = 125 bits (63), Expect = 2e-28
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 612 ccctttaacctacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaa 671
||||| |||||||||||||||||||| ||||| ||||||| |||||| |||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 672 cacgatgttcccggcacccgcacggtgaaaccatggaatgctgagaggttt 722
| ||||| |||||||||||||||||||| |||| ||||||| ||||||||
Sbjct: 420 cgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggttt 370
>BF01049B1F01
Length = 840
Score = 119 bits (60), Expect = 1e-26
Identities = 106/120 (88%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 553 aggtagagagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatc 612
||||||||||||||||||||||||| |||||| | ||| |||| | ||||||||||| |
Sbjct: 706 aggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggc-c 648
Query: 613 cctttaacctacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaac 672
|||| |||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||
Sbjct: 647 ccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaac 588
>BF01016B1E06
Length = 606
Score = 107 bits (54), Expect = 4e-23
Identities = 106/121 (87%), Gaps = 3/121 (2%)
Strand = Plus / Minus
Query: 553 aggtagagagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatc 612
||||||||||||||| |||||||||||||||||||||| || |||||||||||||| |
Sbjct: 309 aggtagagagaggagattggacggtggaggtgagcgtttaa--cgcgttagataggg-cc 253
Query: 613 cctttaacctacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaac 672
|||| |||||||||||||||||| | ||| | ||||||| |||||| |||| |||||||
Sbjct: 252 ccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaac 193
Query: 673 a 673
|
Sbjct: 192 a 192
>BF01021A2B11
Length = 729
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 559 agagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatcccttta 618
|||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||| |
Sbjct: 373 agagaggagcttggacggtggaggtgagcgtttaacgcgtgttagatcggggcgccttca 432
Query: 619 acctacacctgggt 632
||||||||||||||
Sbjct: 433 acctacacctgggt 446
>BF01017A1F03
Length = 782
Score = 87.7 bits (44), Expect = 4e-17
Identities = 75/83 (90%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 556 tagagagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatccct 615
||||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||
Sbjct: 208 tagagagaggagcttccacggtggaggtgagcgtttaacgcgcattagatagg--tccc- 264
Query: 616 ttaacctacacctgggtcgcaag 638
| |||||||||||||||||||||
Sbjct: 265 taaacctacacctgggtcgcaag 287
>BF01043B1E03
Length = 830
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 553 aggtagagagaggagcttggacggtggaggtgagcgttcaacgcgcgttagatagggatc 612
|||||||||||||| ||||||| |||||||||||| | |||||||||||||||||| |
Sbjct: 334 aggtagagagaggaccttggacagtggaggtgagcacttaacgcgcgttagataggggcc 393
Query: 613 cctttaacctacacctgggtcgcaaggccca 643
| || |||||| |||||||| ||||| ||||
Sbjct: 394 ctttaaacctatacctgggttgcaagtccca 424
>BF01044B1A07
Length = 806
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 623 acacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaacacgatgttcc 682
|||||||| |||| || ||||||||| ||| |||||| ||||||||| || ||||| ||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 683 cggcacccgcacggtgaaaccatggaatgctgagaggttt 722
|| ||||||||||||||| |||| ||| ||||||| ||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgagaagttt 433
>BF01056B2D01
Length = 728
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 648 ctgttaaagctcttctccctgcaacacgatgttcccggcacccgcacggtgaaaccatgg 707
||||| |||||| ||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 156 ctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaattcatgg 97
Query: 708 aatgctgagaggttttgtct 727
|||| |||||||||| ||||
Sbjct: 96 aatgttgagaggtttcgtct 77
>BF01014B2F02
Length = 623
Score = 71.9 bits (36), Expect = 2e-12
Identities = 90/107 (84%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 622 tacacctgggtcgcaaggcccagacactgttaaagctcttctccctgcaacacgatgttc 681
||||||||||||||||| || || | ||| | |||||| |||||||||||| | || |
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 682 ccggcacccgcacggtgaaaccatggaatgctgagaggttttgtctc 728
||||||||||||||||| | ||| |||||||||||||||| |||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,155
Number of extensions: 26379
Number of successful extensions: 26379
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 26369
Number of HSP's successfully gapped: 13
Length of query: 1255
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1238
Effective length of database: 8,119,229
Effective search space: 10051605502
Effective search space used: 10051605502
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)