BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19976 (UTR included)
(3802 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2145_C1 1513 0.0
BF14_28_C1 76 5e-13
>BF14_2145_C1
Length = 809
Score = 1513 bits (763), Expect = 0.0
Identities = 796/809 (98%)
Strand = Plus / Plus
Query: 1562 gttcggctgcgtgtccttggacagcagcagcgaactgtgtgctgctggaggacaggacgt 1621
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gttcggctgcgtgtccttggacagcagcagtgaactgtgtgctgctggaggacaggacgt 60
Query: 1622 cttcgagatatacctgtggtccgtcaaatttgggcgacttttggaggtgctcgcaggtca 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcgagatatacctgtggtccgtcaaatttgggcgacttttggaggtgctcgcaggtca 120
Query: 1682 tgcagctccagtggctagtttagctttcagtccacttctgtctagttccaaactggcctc 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcagctccagtggctagtttagctttcagtccacttctgtctagttccaaactggcctc 180
Query: 1742 cgcctcctgggacaagacggtaaagatatggaactgtatagaaacaagctcggactgtga 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcctcctgggacaagacggtaaagatatggaactgtatagaaacaagctcggactgtga 240
Query: 1802 aactatacaactgggttcggacgcactgcaagtgagcttcagacctgatggagaagagat 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactatacaactgggttcggacgcactgcaagtgagcttcagacctgatggagaagagat 300
Query: 1862 agcagtatcgacgttagacggtaacatatcattcttcaacgccaccacttgcgaccagac 1921
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 agcagtatcgacgttagacggtaacatatcattctttaacgccaccacttgcgaccagac 360
Query: 1922 tgccagtttggaggggagaaacgatctgggagccggcagggccgacaccgatctggttac 1981
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 tgccagtttggaggggagaaacgatctgggagccggcagggccgacaccgacctggttac 420
Query: 1982 accggagaagctgttgaagaccaaagctttcactacgatatgctactcagcggatggcac 2041
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 421 accggagaagctgttgaagaccaaagctttcactacaatatgctactcagcggatggcac 480
Query: 2042 gtgtatcctgggggcaggaaactccaaacacatatgtctgtacagtattaaggagggtgt 2101
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 481 gtgtatcctgggggcaggaaactccaaacacatatgtttgtacagtattaaggaaggtgt 540
Query: 2102 actcatcaagaagtttgtgatcacgcagaacaagtccttggacgctattaatgactttat 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actcatcaagaagtttgtgatcacgcagaacaagtccttggacgctattaatgactttat 600
Query: 2162 aaatcgtcggaacatcaccgaatttggtaatatggcgctggttgaagagagggaggagtt 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatcgtcggaacatcaccgaatttggtaatatggcgctggttgaagagagggaggagtt 660
Query: 2222 ggaaggaggggaggttagggtgaggctgccgggggtcggcgggggagatatggctgatag 2281
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 661 ggaaggaggggaggttagggtgaggctgccgggggtcggcgggnnagnnntggctgatag 720
Query: 2282 gaggctgaaacctgaggttcgtgtgtggtgtgttcgtttctctggtgctgatgaaagctt 2341
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 naggctgaaacctgaggttcgtgtgtggtgtgttcgtttctctggtgctgatgaaagctt 780
Query: 2342 tgcagcagcatgtaccgagggactgctgt 2370
||||||||||||||| |||||||||||||
Sbjct: 781 tgcagcagcatgtactgagggactgctgt 809
>BF14_28_C1
Length = 2025
Score = 75.8 bits (38), Expect = 5e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 204 aagacattaatattagttcctgctctatagatccgtcaaacggctgatagacttttaatc 263
||||||||||||||| ||||||||||| || ||||| ||| |||||| |||| ||||||
Sbjct: 5 aagacattaatattaattcctgctctagaggtccgttaaatggctgacggactattaatc 64
Query: 264 tattgaattgacaaaattcaaatgtc 289
||||| |||| ||||| |||| ||||
Sbjct: 65 tattgtattgtcaaaactcaattgtc 90
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,491
Number of extensions: 5585
Number of successful extensions: 5585
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5584
Number of HSP's successfully gapped: 2
Length of query: 3802
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3784
Effective length of database: 8,109,745
Effective search space: 30687275080
Effective search space used: 30687275080
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)