BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19981 (UTR included)
(1657 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A2D08 1469 0.0
>BF01048A2D08
Length = 745
Score = 1469 bits (741), Expect = 0.0
Identities = 744/745 (99%)
Strand = Plus / Plus
Query: 353 atttacatttttttactatttttttttattacttttataaacataggttacaaaacaaag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttacatttttttactatttttttttattacttttataaacataggttacaaaacaaag 60
Query: 413 tccaactttgaaaggctcaacgtccactacttaaccaattaagtttaatgtttcgctatt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccaactttgaaaggctcaacgtccactacttaaccaattaagtttaatgtttcgctatt 120
Query: 473 ttagcaataagttcagtttcccgtagcaatgtctttgtcacctcaaattttattatcgaa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagcaataagttcagtttcccgtagcaatgtctttgtcacctcaaattttattatcgaa 180
Query: 533 aacggtacgggaaaaatgtgttgcaaaatttaaagaattaccatcatacatacagcccgg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacggtacgggaaaaatgtgttgcaaaatttaaagaattaccatcatacatacagcccgg 240
Query: 593 gaatcttttaaaacctcgtgccgctgtgttagtccctttattcattcaaaatggtgaagt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaatcttttaaaacctcgtgccgctgtgttagtccctttattcattcaaaatggtgaagt 300
Query: 653 ccacctgttgtatacccttagatcgagtaatttgaagaatcacagtggtcaagtatcgtt 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccacctgttgtatacccttagatcgagtaatttgaagaatcacagtggtcaagtatcgtt 360
Query: 713 cccaggtggaaaagtcgatgaaaatgaatcactgattgaaactgctttgagggaaactca 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccaggtggaaaagtcgatgaaaatgaatcactgattgaaactgctttgagggaaactca 420
Query: 773 tgaagaaattggtgtcccgccatcatcagtcaatgtttggggtgaaatgcctccaatgca 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaagaaattggtgtcccgccatcatcagtcaatgtttggggtgaaatgcctccaatgca 480
Query: 833 gggtcgcgatggcaacatcttaattactcctgtggtaggagtcattacagatttggacgt 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggtcgcgatggcaacatcttaattactcctgtggtaggagtcattacagatttggacgt 540
Query: 893 aaaaaaactaaatcctaacatacatgaagtagccgagatattttctgtatcaatgtcatc 952
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaaaactaaatcctaacatacacgaagtagccgagatattttctgtatcaatgtcatc 600
Query: 953 attttgtaataaaaataatcatgctcattttaaatacaatgatataattcttccggtgta 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attttgtaataaaaataatcatgctcattttaaatacaatgatataattcttccggtgta 660
Query: 1013 tttgtcagggaaccacaggatatggggtatcacaggttttataacacatatgtttctcca 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttgtcagggaaccacaggatatggggtatcacaggttttataacacatatgtttctcca 720
Query: 1073 gtgtttccttcccaaagaactgtat 1097
|||||||||||||||||||||||||
Sbjct: 721 gtgtttccttcccaaagaactgtat 745
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 421,155
Number of extensions: 15860
Number of successful extensions: 15860
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15860
Number of HSP's successfully gapped: 1
Length of query: 1657
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1640
Effective length of database: 8,119,229
Effective search space: 13315535560
Effective search space used: 13315535560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)