BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19982 (UTR included)
(1627 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_241_C1 618 e-177
>BF14_241_C1
Length = 744
Score = 618 bits (312), Expect = e-177
Identities = 324/328 (98%)
Strand = Plus / Plus
Query: 819 gtagtgcagataccggactgttcgtgttctagagaggccaaacccgtctgtggaactgat 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtagtgcagataccggactgttcgtgttctagagaggccaaacccgtctgtggaactgat 476
Query: 879 ggacatacatacaacaacccgtgtatgctgaactgcgccaaagatgtcttagaagacctc 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggacatacatacaacaacccgtgtatgctgaactgcgccaaagatgtcttagaagacctc 536
Query: 939 cacgttttccacgagggaccctgcatgattgagggcaaaaaatttgatcccgaagtccgt 998
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 537 cacgttttccacgagggaccctgcatgattgagggcaaaaaattcgatccccaagtccgt 596
Query: 999 aactgcgggtgcaccagaaaccttcagccagtgtgtgcttctgacggcgtcacatacaat 1058
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aactgcgagtgcaccagaaaccttcagccagtgtgtgcttctgacggcgtcacatacaat 656
Query: 1059 aatgaatgcctcatgaggtgcgccggcgaggaccttgtggtacagaaggacgaaccctgt 1118
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 657 aatgaatgcctcatgaggtgcgccggcgaggaccttgtggtacagaaagacgaaccctgt 716
Query: 1119 gatgattaatctctttatatatatatga 1146
||||||||||||||||||||||||||||
Sbjct: 717 gatgattaatctctttatatatatatga 744
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 583 tgataagcattattgataaaaatataaacatgattcatcgaggctacatgctcttcctcg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 tgataagcattattgataaaaatataaacatgattcatcgaggctacatgctcttcctcg 93
Query: 643 tgggcacgttcgcgtcaatgacgtcagctctgccgccgtgcgtgtgtccgaagaacatga 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgggcacgttcgcgtcaatgacgtcagctctgccgccgtgcgtgtgtccgaagaacatga 153
Query: 703 aaccggtatgcggttccgacggccagacttacaacaacgaatgtctcctgaactgccaga 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aaccggtatgcggttccgacggccagacttacaacaacgaatgtctcctgaactgccaga 213
Query: 763 agattgataaccctgacctcgtcgtggataaagtcggaagctgcgagcaaaaatccg 819
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 agattgataaccctgacctcgtcgtggataaagtcggaagctgcgagcaaaaatccg 270
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,320
Number of extensions: 10020
Number of successful extensions: 10020
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10020
Number of HSP's successfully gapped: 2
Length of query: 1627
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1610
Effective length of database: 8,119,229
Effective search space: 13071958690
Effective search space used: 13071958690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)