BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19986 (UTR included)
(2035 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1F01 1336 0.0
BF14_3391_C1 323 6e-88
>BF01050B1F01
Length = 797
Score = 1336 bits (674), Expect = 0.0
Identities = 711/725 (98%)
Strand = Plus / Plus
Query: 468 aggttaagaattcggcaggattttaagtattttatgagatgtttatcggataaagtgcca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aggttaagaattcggcaggattttaagtattttatgagatgtttatcggataaagtgcca 132
Query: 528 gaacacgatgctggaatacccgagatcaaaactaaaaatcccaaagatcaaaagaaatct 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gaacacgatgctggaatacccgagatcaaaactaaaaatcccaaagatcaaaagaaatct 192
Query: 588 tcagatgctactgataaaattcaatctcttttaaaaagtatgatggcagaacctaaaatc 647
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 193 tcagatgccactgataaaattcaatctcttttgaaaagtatgatggcagaacctaaaatc 252
Query: 648 tcggacagtgaataccgagagagatttaccacagctcccgagcgacgaaaaaagcaaatt 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcggacagtgaataccgagagagatttaccacagctcccgagcgacgaaaaaagcaaatt 312
Query: 708 gcagatgaagtagaagttaaaatagaaaaaatagaggaatctataacaaaagcagccgaa 767
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcagatgaagtggaagttaaaatagaaaaaatagaggaatctataacaaaagcagccgaa 372
Query: 768 gacgttgcccagacccttggtggtaatgtgaaacaaaccgaagcagaactgctttcaagg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gacgttgcccagacccttggtggtaatgtgaaacaaaccgaagcagaactgctttcaagg 432
Query: 828 gtactcggtaaaatcaatcaaacgtctacaacccttagtgatttgattgttggcatgaaa 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtactcggtaaaatcaatcaaacgtctacaacccttagtgatttgattgttggcatgaaa 492
Query: 888 gtagataggtctaaagacagagaggatccggcacagtgggaaaacagaggccaacaagtc 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtagataggtctaaagacagagaggatccggcacagtgggaaaacagaggccaacaagtc 552
Query: 948 aaacgtctagtgacaaagtctaaatcggataatatcagaaataatcagaggaaatccacc 1007
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 553 aaacgtctagtgacaaagtctaaatcggatagtatcagaaacaatcagaggaaatccacc 612
Query: 1008 aatcagagagattctcagcagtccagaccgaacaggaatttaccgcaaataagtacagtg 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aatcagagagattctcagcagtccagaccgaacaggaatttaccgcaaataagtacagtg 672
Query: 1068 aatatattcagtggggagcccctgggcattttccggaaagagggtccggtcaatcatggt 1127
|||||||||||||| ||||||||||||||||| | |||||||||||||||||||||
Sbjct: 673 aatatattcagtggagagcccctgggcatttttcnnnnngagggtccggtcaatcatggt 732
Query: 1128 acaaagttagaagtctgggaagaacttaaccaacgggaactgctgttagcgacgtcacaa 1187
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 733 acaaagttagaagtctgggaagaatttaacaaacgggaactgctgttagcgacgtcacaa 792
Query: 1188 ccccc 1192
|||||
Sbjct: 793 ccccc 797
Score = 151 bits (76), Expect = 5e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 317 acctctctttcattattgtttttagaaccttaagtatttaataatattttcccattaaac 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctttcattattgtttttagaaccttaagtatttaataatattttcccattaaac 60
Query: 377 acgatgctatcgaggt 392
||||||||||||||||
Sbjct: 61 acgatgctatcgaggt 76
>BF14_3391_C1
Length = 990
Score = 323 bits (163), Expect = 6e-88
Identities = 169/172 (98%)
Strand = Plus / Minus
Query: 1862 cgtcatataatagtaatgtatagcaaatgaccattttatttctttattcccgtgataaat 1921
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 990 cgtcatataatagtaatgtatagcaaatgaccattnnanttctttattcccgtgataaat 931
Query: 1922 gtaattaaatcttaaaaaacaaggaacttattacatctaagtacgtattcttatattatt 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 gtaattaaatcttaaaaaacaaggaacttattacatctaagtacgtattcttatattatt 871
Query: 1982 tgtcgtatactttaaaagcctccaaaacgtttccaaatgaagaaaaaaaaaa 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tgtcgtatactttaaaagcctccaaaacgtttccaaatgaagaaaaaaaaaa 819
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,782
Number of extensions: 7003
Number of successful extensions: 7003
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7002
Number of HSP's successfully gapped: 3
Length of query: 2035
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2018
Effective length of database: 8,119,229
Effective search space: 16384604122
Effective search space used: 16384604122
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)