BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19987 (UTR included)
(2464 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_610_C1 3780 0.0
BF14_562_C1 161 7e-39
>BF14_610_C1
Length = 1976
Score = 3780 bits (1907), Expect = 0.0
Identities = 1957/1976 (99%), Gaps = 9/1976 (0%)
Strand = Plus / Plus
Query: 423 gtcctttaccagttagcttctcattgtagttcgtcgccggggtttaacgcacggagatta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcctttaccagttagcttctcattgtagttcgtcgccggggtttaacgcacggagatta 60
Query: 483 tatctgtgaagtttaaaaatgttgggatcaataaaaatctttttattattaggagttatt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatctgtgaagtttaaaaatgttgggatcaataaaaatctttttattattaggagttatt 120
Query: 543 tatttatgtaaagcaagcgaagaagatgttttagagcttacagattccgattttgaaagt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatttatgtaaagcaagcgaagaagatgttttagagcttacagattccgattttgaaagt 180
Query: 603 gcgatcggtcaacatgaaaccgctttggtcatgttttacgcaccttggtgtggacattgt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgatcggtcaacatgaaaccgctttggtcatgttttacgcaccttggtgtggacattgt 240
Query: 663 aaaagattgaaaccggaatatgcggttgcggccggcattctcaaggatgatgatccgccg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagattgaaaccggaatatgcggttgcggccggcattctcaaggatgatgatccgccg 300
Query: 723 gtagcgttggccaaagtagactgcacggaagctggaaagagcacttgtgaaaagttctcc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtagcgttggccaaagtagactgcacggaagctggaaagagcacttgtgaaaagttctcc 360
Query: 783 gtctcaggatatccaacccttaaaatcttcaggaaaggggagctgtcacaggagtacaat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctcaggatatccaacccttaaaatcttcaggaaaggggagctgtcacaggagtacaat 420
Query: 843 ggtcccagggaatcta---------acgggattgtgaagtacatgagagctcaagtcgga 893
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtcccagggaatctattttactagacgggattgtgaagtacatgagagctcaagtcgga 480
Query: 894 ccaagttccaaggaattactcaatgttgagagcttcgagaacatgatatccaaggatgag 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagttccaaggaattactcaatgttgagagcttcgagaacatgatatccaaggatgag 540
Query: 954 gtggttgttattggtttctttgaaaaggaggatgacctcaagggagaattcttgaaaacc 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtggttgttattggtttctttgaaaaggaggatgacctcaagggagaattcttgaaaacc 600
Query: 1014 gctgacaaaatgagagaagaagtttcctttgctcactcgtctgctaaggatgtcctcgaa 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctgacaaaatgagagaagaagtttcctttgctcactcgtctgctaaggatgtcctcgaa 660
Query: 1074 aaatctggatacaagaacaatgtagtcctgtaccgtcccaagcgtttacaaaacaagttt 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaatctggatacaagaacaatgtagtcctgtaccgtcccaagcgtttacaaaacaagttt 720
Query: 1134 gaagactcatttgttgtgtacaagagtggcgtctcgcttaaaggcttcatcaaagaaaac 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaagactcatttgttgtgtacaagagtggcgtctcgcttaaaggcttcatcaaagaaaac 780
Query: 1194 taccacggtctggttggtatccgtcagaaggacaatatgaatgacttcagcaatcccctt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 taccacggtctggttggtatccgtcagaaggacaatatgaatgacttcagcaatcccctt 840
Query: 1254 gtggttgcctactatgatgtggactatgtcaagaaccccaagggtaccaactactggagg 1313
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 841 gtggttgcctactatgatgtggactacgtcaagaaccccaagggtaccaactactggagg 900
Query: 1314 aaccgcgtgctcaaagtggccaaagagatgaaggacgttaacttcgcggtcagtgacaag 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaccgcgtgctcaaagtggccaaagagatgaaggacgttaacttcgcggtcagtgacaag 960
Query: 1374 gatgacttcacccacgagctgaacgacttcggcatcgacttcgccaaaggcgacaaaccc 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gatgacttcacccacgagctgaacgacttcggcatcgacttcgccaaaggcgacaaaccc 1020
Query: 1434 gtggtaggaggcaaggatgctgatgggaacaagttcgttatgtcttccgaattcagcatt 1493
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1021 gtggtaggaggcaaggatgctgatgggaacaagttcgttatgtcttccgaattcagtatt 1080
Query: 1494 gaaaaccttttggccttcgccaaggatctcttggatggtaaattggagccgttcatcaag 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gaaaaccttttggccttcgccaaggatctcttggatggtaaattggagccgttcatcaag 1140
Query: 1554 tccgagccagtccctgagaataacgatggaccggtcaaggtagctgttggcaagaacttc 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tccgagccagtccctgagaataacgatggaccggtcaaggtagctgttggcaagaacttc 1200
Query: 1614 aaggagttagtcacagacagcggaagggacgctctagtcgaattctacgccccctggtgc 1673
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1201 aaggagttagtcacagacagcggaagggacgctctagtggaattctacgccccctggtgc 1260
Query: 1674 ggccattgccaaaaactggcacctgtttgggaagaacttggtgaaaagctcaaagacgaa 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ggccattgccaaaaactggcacctgtttgggaagaacttggtgaaaagctcaaagacgaa 1320
Query: 1734 gatgttgatatagtgaagatcgacgctacagccaacgactggcccaagtcgctgtacgac 1793
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gaggttgatatagtgaagatcgacgctacagccaacgactggcccaagtcgctgtacgac 1380
Query: 1794 gtctccggtttcccgaccatcttctggaaaccgaaggataacagcaagaagcctgtcaga 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1381 gtctccggtttcccgaccatcttctggaaaccgaaggataacagcaagaagcccgtcaga 1440
Query: 1854 tataacggtgggcgagccctcgaggacttcgtgaagtacgtgtccgacaatgcttccaac 1913
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tacaacggtgggcgagccctcgaggacttcgtgaagtacgtgtccgacaatgcttccaac 1500
Query: 1914 gagctgaaaggcttcgacaggaaagggaacgccaagaaagacgagttgtagacttattag 1973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gagctgaaaggcttcgacaggaaagggaacgccaagaaagacgagttgtagacttattag 1560
Query: 1974 atcaaactttccagatctgtgtgtgagtgggcgaatgtgtagtgtgcaaccgatattcac 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 atcaaactttccagatctgtgtgtgagtgggcgaatgtgtagtgtgcaaccgatattcac 1620
Query: 2034 ttatcttactatatagttgggaacacgtaccacaagtttgcatcttcaaactacatacgc 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ttatcttactatatagttgggaacacgtaccacaagtttgcatcttcaaactacatacgc 1680
Query: 2094 agcgttttcagttcttagcctacttcatacttcaacttgcactagtccatcatatgcgaa 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 agcgttttcagttcttagcctacttcatacttcaacttgcactagtccatcatatgcgaa 1740
Query: 2154 aatgattactgaaaactgaaaacgcccaatatgtactgggacaatgcaaactttggtgag 2213
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1741 aatgattactgaaaactgaaaacgcccaatatgtannnggacaatgcaaactttggtgag 1800
Query: 2214 agtactagaggacatatccacaaagctcttatgcataataagaactactactttgtatag 2273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 agtactagaggacatatccacaaagctcttatgcataataagaactactactttgtatag 1860
Query: 2274 agaatggtgtaactttgtttgaggttttgtcgataaatgtgggaagggtgaatgaaaaag 2333
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1861 agaatggtgtaactttgtttgaggttttgtcgatgaatgtgggaagggtgaatgaaaaag 1920
Query: 2334 gatttatatgtgagacaactagtataccttcatagataaaaccctcacagtgatcg 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gatttatatgtgagacaactagtataccttcatagataaaaccctcacagtgatcg 1976
>BF14_562_C1
Length = 801
Score = 161 bits (81), Expect = 7e-39
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 19 accgaaaagatttacggtacaagttgtattgttgcctctgtccagaacgacaacactcgt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 accgaaaagatttacggtacaagttgtattgttgcctctgtccagaacgacaacactcgt 22
Query: 79 cgctgccattttccgattgac 99
|||||||||||||||||||||
Sbjct: 21 cgctgccattttccgattgac 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,871
Number of extensions: 4345
Number of successful extensions: 4345
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4345
Number of HSP's successfully gapped: 3
Length of query: 2464
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2447
Effective length of database: 8,119,229
Effective search space: 19867753363
Effective search space used: 19867753363
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)