BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19990 (UTR included)
(1363 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A2E05 1291 0.0
>BF01052A2E05
Length = 844
Score = 1291 bits (651), Expect = 0.0
Identities = 685/694 (98%), Gaps = 3/694 (0%)
Strand = Plus / Plus
Query: 673 atggtatctatgtaacagaagtgcatgaagggagcccagcggcaaagtcaggattaagaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtatctatgtaacagaagtgcatgaagggagcccagcggcaaagtcaggattaagaa 60
Query: 733 tgcatgataaaattctccagtgcaacggctacgacttcaccatggtaacacataaaaagg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcatgataaaattctccagtgcaacggctacgacttcaccatggtaacacataaaaagg 120
Query: 793 ccgtcagctacataaaaaaacatcctgtacttaacttacttgtagcaagaaaaggagtca 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgtcagctacataaaaaaacatcctgtacttaacttacttgtagcaagaaaaggagtca 180
Query: 853 catccacataatgatgtgacataaaatgaatttaattttgagagcattcaaaaagtattg 912
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 181 catccacataatgatgtgacataaaatgaatttaatttggagtgcattcaaaaagtattg 240
Query: 913 taaatgtgattttagtgttatttatttttaataatattaagttttcattatatttaaacg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaatgtgattttagtgttatttatttttaataatattaagttttcattatatttaaacg 300
Query: 973 gtggagtactcatagaagtaattgttaattatagttttatattttggtaacttaggagag 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagtactcatagaagtaattgttaattatagttttatattttggtaacttaggagag 360
Query: 1033 cttagtgagttaccatattttacttaatttaacagcttgacaaacatttgggcaagctcg 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttagtgagttaccatattttacttaatttaacagcttgacaaacatttgggcaagctcg 420
Query: 1093 gcaagggataaatgagctacttagtttgaattgaatcatgtatagataatacaaattcaa 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaagggataaatgagctacttagtttgaattgaatcatgtatagataatacaaattcaa 480
Query: 1153 tatatttaaaattatttcatctatttataaatgttgttgtattcagtaatttaaatttat 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatatttaaaattatttcatctatttataaatgttgttgtattcagtaatttaaatttat 540
Query: 1213 gagatattgtaatgttattaatttgtattttcg-atctttttttttttaattttgtaac- 1270
||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||
Sbjct: 541 gagatattgtaatgttattaatttgtattttcgaatattttttttttaaattttgtaacg 600
Query: 1271 -acattccgtatattattcattgtgccaaatttaagtgattatgcaattgatgtttttga 1329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacattccgtatattattcattgtgccaaatttaagtgattatgcaattgatgtttttga 660
Query: 1330 gataagtaaattttttttcttcgccaagtcattt 1363
||||||||||||||||||||| |||||||||||
Sbjct: 661 aataagtaaattttttttcttcaccaagtcattt 694
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,295
Number of extensions: 7181
Number of successful extensions: 7181
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7179
Number of HSP's successfully gapped: 1
Length of query: 1363
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1346
Effective length of database: 8,119,229
Effective search space: 10928482234
Effective search space used: 10928482234
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)