BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19993 (UTR included)
(3694 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1E10 646 0.0
>BF01044B1E10
Length = 759
Score = 646 bits (326), Expect = 0.0
Identities = 326/326 (100%)
Strand = Plus / Plus
Query: 3369 ggggaatcaatgtcaatacgggtcgggaagacattgcgggcgagagctcacgtgctaaca 3428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggggaatcaatgtcaatacgggtcgggaagacattgcgggcgagagctcacgtgctaaca 313
Query: 3429 cctgcctgctctatatatatgtacctgagccatcagtaaccatacgcactcgctcaatac 3488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cctgcctgctctatatatatgtacctgagccatcagtaaccatacgcactcgctcaatac 373
Query: 3489 aaagcatccaaggactaggacgagggctcgtagcggctctacggctacaagtgctacgac 3548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaagcatccaaggactaggacgagggctcgtagcggctctacggctacaagtgctacgac 433
Query: 3549 ggctacgagcactgcacctggacctggcggctcgtggcttagcggaggcgtgacgtcatc 3608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggctacgagcactgcacctggacctggcggctcgtggcttagcggaggcgtgacgtcatc 493
Query: 3609 gcgcctgactatactctaatattgcatgaaccttagaatagcagtagcttttaattagaa 3668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gcgcctgactatactctaatattgcatgaaccttagaatagcagtagcttttaattagaa 553
Query: 3669 tgaaataaatttaattttaaagaagt 3694
||||||||||||||||||||||||||
Sbjct: 554 tgaaataaatttaattttaaagaagt 579
Score = 490 bits (247), Expect = e-138
Identities = 253/255 (99%)
Strand = Plus / Plus
Query: 2961 ttccgcggcatctgtcagatgatccaagtgaatccggcgggggtggtgcccgactttatg 3020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccgcggcatctgtcagatgatccaagtgaatccggcgggggtggtgcccgactttatg 60
Query: 3021 ttcttctgtgacgccgtggcttcatggacgcatcccaaggacgacctcaaggagatgttt 3080
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ttcttctgtgacgccgtggcttcgtggacgcatcccaaggacgacctgaaggagatgttt 120
Query: 3081 acgaagatcctccacgggttcaagaaccaggtcggagaagacaactggcgacgtttcacc 3140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgaagatcctccacgggttcaagaaccaggtcggagaagacaactggcgacgtttcacc 180
Query: 3141 gaccagttcccggtacagctcagcgcccgcctctccgccatgtgcgggatataggacgga 3200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaccagttcccggtacagctcagcgcccgcctctccgccatgtgcgggatataggacgga 240
Query: 3201 cagcgacatatgtgg 3215
|||||||||||||||
Sbjct: 241 cagcgacatatgtgg 255
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,013
Number of extensions: 8932
Number of successful extensions: 8932
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8932
Number of HSP's successfully gapped: 2
Length of query: 3694
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3676
Effective length of database: 8,109,745
Effective search space: 29811422620
Effective search space used: 29811422620
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)