BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19997 (UTR included)
(2083 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B1B06 1544 0.0
BF14_1447_C1 1403 0.0
BF01052A2B11 139 2e-32
>BF01040B1B06
Length = 805
Score = 1544 bits (779), Expect = 0.0
Identities = 791/795 (99%)
Strand = Plus / Plus
Query: 381 gagcgtgtgacagtaacagagtaactgtaagataaattaactttcaattgtggttttaac 440
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcgcgtgacagtaacagagtaactgtaagataaattaactttcaattgtggttttaac 60
Query: 441 ttttgtttacgttaattattaattttcaccattaagaaatcgtaaaattgtgccttaaac 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgtttacgttaattattaattttcaccattaagaaatcgtaaaattgtgccttaaac 120
Query: 501 atgcctcgatatcatacagttgagataaataaaacagaatggattgtacccgaaagatat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcctcgatatcatacagttgagataaataaaacagaatggattgtacccgaaagatat 180
Query: 561 caaatgcttacacctgtaggttctggcgcttacggccaagtttgctcagccatagacact 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaatgcttacacctgtaggttctggcgcttacggccaagtttgctcagccatagacact 240
Query: 621 gtacataacatgaaagtcgctataaagaaattagcaagaccatttcagtctgctgtacat 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtacataacatgaaagtcgctataaagaaattagcaagaccatttcagtctgctgtacat 300
Query: 681 gctaagagaacttacagagaactgagaatgttaaaacacatgaaccatgaaaatgttatc 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctaagagaacttacagagaactgagaatgttaaaacacatgaaccatgaaaatgttatc 360
Query: 741 ggccttctagatgtgttcactccagaaaagaatctggaggattttcagcaagtgtactta 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggccttctagatgtgttcactccagaaaagaatctggaggattttcagcaagtgtactta 420
Query: 801 gttactcacttgatgggagcagacttgaataatatcgtccgcactcagaagttatccgat 860
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttactcacttgatgggagcggacttgaataatatcgtccgcactcagaagttatccgat 480
Query: 861 gatcacgtacagttcctcatctatcagatactaagaggcctaaagtatatacactccgcc 920
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatcacgttcagttcctcatctatcagatactaagaggcctaaagtatatacactccgcc 540
Query: 921 ggtattattcatagggacttgaaaccttccaatattgctgtgaatgaagactgcgaattg 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtattattcatagggacttgaaaccttccaatattgctgtgaatgaagactgcgaattg 600
Query: 981 aaaatattagattttggcctagcacggcctactgagactgaaatgacaggctatgtcgcc 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaatattagattttggcctagcacggcctactgagactgaaatgacaggctatgtcgcc 660
Query: 1041 acaaggtggtatagggcaccagagatcatgttaaactggatgcactacaatcagactgta 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acaaggtggtatagggcaccagagatcatgttaaactggatgcactacaatcagactgta 720
Query: 1101 gatatttggtcagttggatgcattatggctgaacttcttactggcaggacattatttcct 1160
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatatttggtcggttggatgcattatggctgaacttcttactggcaggacattatttcct 780
Query: 1161 ggtacagatcatatt 1175
|||||||||||||||
Sbjct: 781 ggtacagatcatatt 795
>BF14_1447_C1
Length = 1119
Score = 1403 bits (708), Expect = 0.0
Identities = 723/728 (99%)
Strand = Plus / Plus
Query: 1356 gagctggacgctgacaagcgtgtgacagctgagcaggcgttggcccacgaatatctatcg 1415
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 gagctggacgctgacaagcgtgtgacagctgacctggcgttggcccacgaatatctatcg 60
Query: 1416 cagtacgctgaccccacagacgagccggtctccgcgccttacgaccagagcttcgaggac 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagtacgctgaccccacagacgagccggtctccgcgccttacgaccagagcttcgaggac 120
Query: 1476 atggacctgccggtcgacaagtggaaagaattagtatggaaggaggtcgtggagttcaaa 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggacctgccggtcgacaagtggaaagaattagtatggaaggaggtcgtggagttcaaa 180
Query: 1536 ccccatcctcagcacatgaacacggtcatcgaagtcaacccgtcgtaatcgtgaacataa 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccccatcctcagcacatgaacacggtcatcgaagtcaacccgtcgtaatcgtgaacataa 240
Query: 1596 caacgcaagctatatatttttaaaaagtcaattatctttctacgtatcatttatacgtga 1655
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 caacgcaagctatatatttttaaaaagtcaattatcttcctacgtatcatttatacgtga 300
Query: 1656 aataaattattacaaacggatgtcatatgatgacattctttacatcgcaaattaaataaa 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aataaattattacaaacggatgtcatatgatgacattctttacatcgcaaattaaataaa 360
Query: 1716 cgtattttataacgtaatcgtgtgatgcgtcgctcagacagctgcggctgttgtgtatgt 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtattttataacgtaatcgtgtgatgcgtcgctcagacagctgcggctgttgtgtatgt 420
Query: 1776 tatatacctatgtaatattttttaatcacgctatttacaactgaaacaatgtatttatat 1835
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 tatatacctatgtaatattttttaatcgcgctatttacaactgaaacaatgtatttatat 480
Query: 1836 gcccttaccacggattttcattgtaaactaaacggattattttaattttttcattcatat 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcccttaccacggattttcattgtaaactaaacggattattttaattttttcattcatat 540
Query: 1896 atctacgtagatgctataaagtgtggagtatgaaattaaaaactgagaattttccgtatt 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atctacgtagatgctataaagtgtggagtatgaaattaaaaactgagaattttccgtatt 600
Query: 1956 tagtgtgacaatgagaacgtatggtaaacgtaaaacgcttgtaatttattagtcattata 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tagtgtgacaatgagaacgtatggtaaacgtaaaacgcttgtaatttattagtcattata 660
Query: 2016 atcaacattcacgatgacaatcagagagtgttatattgaattttattgcttcgccttgga 2075
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 661 atcaacattcacgatgacaatcagacagtgttatattgaattttattgcttcgccttgga 720
Query: 2076 aatgtatt 2083
||||||||
Sbjct: 721 aatgtatt 728
>BF01052A2B11
Length = 551
Score = 139 bits (70), Expect = 2e-32
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 1 tgccaagacatctttccctttcggacgcaacccgtccggttatggtcatgggctttacgc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tgccaagacatctttccctttgggacgcaacccgtccggttatggtcatgggctttacgc 15
Query: 61 ccgctgtttgagcc 74
||||||||||||||
Sbjct: 14 ccgctgtttgagcc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,754
Number of extensions: 4649
Number of successful extensions: 4649
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4649
Number of HSP's successfully gapped: 3
Length of query: 2083
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2066
Effective length of database: 8,119,229
Effective search space: 16774327114
Effective search space used: 16774327114
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)