BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20012 (UTR included)
(2347 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2114_C1 1199 0.0
BF01011A1H06 70 2e-11
BF14_729_C2 70 2e-11
>BF14_2114_C1
Length = 845
Score = 1199 bits (605), Expect = 0.0
Identities = 641/653 (98%)
Strand = Plus / Plus
Query: 1194 gaagggctgagtcggcactcggtgctggggaatatggtcggggagtacgacgctggagga 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagggctgagtcggcactcggtgctggggaatatggtcggggagtacgacgctggagga 60
Query: 1254 tccaagagccacctcctcatgagggataagggcaggaaggtgtcgatccgcggccaggcg 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccaagagccacctcctcatgagggataagggcaggaaggtgtcgatccgcggccaggcg 120
Query: 1314 ttcggggttggcgccttcgaggctgatgacgaagatatatacagcagagaggacatgacg 1373
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcggggttggcgccttcgaggccgatgacgaagatatatacagcagagaggacatgacg 180
Query: 1374 cattacgactacgagatgggaccggaagtgacgacgaagaagcacgtcgctaaacagcaa 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattacgactacgagatgggaccggaagtgacgacgaagaagcacgtcgctaaacagcaa 240
Query: 1434 aataatgtgctccagggtttcgttaagtccaaggctaaaccgccgtcggtggcctcgtac 1493
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aataatgtgctccagggcttcgttaagtccaaggctaaaccgccgtcggtggcctcgtac 300
Query: 1494 cccccgcccactctgccacggggctatgtcccagcaaccagacgctcaagattcgacgag 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccccgcccactctgccacggggctatgtcccagcaaccagacgctcaagattcgacgag 360
Query: 1554 agtaggcctccgcagagggaccaaggtctcggacgacatgaactgacatcagcggcgaga 1613
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtagggctccgcagagggaccaaggtctcggacgacatgaactgacatcagcggcgaga 420
Query: 1614 ggagctctcttaggagagacgcccgtggacagcgcagaacacacacaacgcaaggagccg 1673
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagctctgttaggagagacgcccgtggacagcgcagaacacacacaacgcaaggagccg 480
Query: 1674 gagccgcaggccgcgtctgacacgaagatagttggaatagttacagacatcaccgtcccg 1733
| ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||
Sbjct: 481 ggaccgcaggccgcgtctgacacgaagatagtcgaaatagttacagacatgaccgtcccg 540
Query: 1734 ccggacgccggggagctgaattacatatcgataaaaaatacagacaaatccaatctgaag 1793
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 541 ccggacgccagggagctgaattacatatcgataaaaaacacagacaaatccaatctgaag 600
Query: 1794 gttttcaagccgttcgccagcgaccctcagaagcagctgagatatgagaggta 1846
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgttcaagccgttcgccagcgaccctcagaagcagctgagatatgagaggta 653
Score = 652 bits (329), Expect = 0.0
Identities = 356/365 (97%)
Strand = Plus / Plus
Query: 1848 agaggagctctcttaggagagactcccgtggacagcgcagaacacacacaacgcaaggag 1907
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 418 agaggagctctgttaggagagacgcccgtggacagcgcagaacacacacaacgcaaggag 477
Query: 1908 ccgggaccgcaggccgcgtctgacacgaagatagttgaagtagttacagacatgaccgtc 1967
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 478 ccgggaccgcaggccgcgtctgacacgaagatagtcgaaatagttacagacatgaccgtc 537
Query: 1968 ccgccggacgccagggagctgaattacatatcgataaaaaactcagacaaatccaatctg 2027
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 538 ccgccggacgccagggagctgaattacatatcgataaaaaacacagacaaatccaatctg 597
Query: 2028 aaagttttcaagccgttcgccagcgacccccaaaagcagctgagatatgagaggtacttg 2087
|| || ||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 598 aaggtgttcaagccgttcgccagcgaccctcagaagcagctgagatatgagaggtacttg 657
Query: 2088 gagatgaagccagagagggaaggcgctagcgatagattgactcagtgggagagggacaga 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gagatgaagccagagagggaaggcgctagcgatagattgactcagtgggagagggacaga 717
Query: 2148 gagatggcggagttcgagcaggctgcgaaactgtacaagccgttgagcggcgtcatgggc 2207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gagatggcggagttcgagcaggctgcgaaactgtacaagccgttgagcggcgtcatgggc 777
Query: 2208 gacag 2212
|||||
Sbjct: 778 gacag 782
>BF01011A1H06
Length = 739
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 10 tacgcgtattttattattgtaaaaaaccacatactcccgacgtttcggttacttt 64
||||||| |||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 543 tacgcgtgatttatttttgtaaaagactacatactcccgacgtttcggttacttt 489
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 10 tacgcgtattttattattgtaaaaaaccacatactcccgacgtttcggttacttt 64
||||||| |||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 611 tacgcgtgctttatttttgttaaaaactacatactcccgacgtttcggttacttt 557
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,589
Number of extensions: 4244
Number of successful extensions: 4244
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4244
Number of HSP's successfully gapped: 4
Length of query: 2347
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2330
Effective length of database: 8,119,229
Effective search space: 18917803570
Effective search space used: 18917803570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)