BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20013 (UTR included)
(2278 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2114_C1 769 0.0
>BF14_2114_C1
Length = 845
Score = 769 bits (388), Expect = 0.0
Identities = 418/428 (97%)
Strand = Plus / Plus
Query: 390 agaggagctctcttaggagagactcccgtggacagcgcagaacacacacaacgcaaggag 449
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 418 agaggagctctgttaggagagacgcccgtggacagcgcagaacacacacaacgcaaggag 477
Query: 450 ccgggaccgcaggccgcgtctgacacgaagatagttgaagtagttacagacatgaccgtc 509
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 478 ccgggaccgcaggccgcgtctgacacgaagatagtcgaaatagttacagacatgaccgtc 537
Query: 510 ccgccggacgccagggagctgaattacatatcgataaaaaactcagacaaatccaatctg 569
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 538 ccgccggacgccagggagctgaattacatatcgataaaaaacacagacaaatccaatctg 597
Query: 570 aaagttttcaagccgttcgccagcgacccccaaaagcagctgagatatgagaggtacttg 629
|| || ||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 598 aaggtgttcaagccgttcgccagcgaccctcagaagcagctgagatatgagaggtacttg 657
Query: 630 gagatgaagccagagagggaaggcgctagcgatagattgactcagtgggagagggacaga 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gagatgaagccagagagggaaggcgctagcgatagattgactcagtgggagagggacaga 717
Query: 690 gagatggcggagttcgagcaggctgcgaaactgtacaagccgttgagcggcgtcatgggc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gagatggcggagttcgagcaggctgcgaaactgtacaagccgttgagcggcgtcatgggc 777
Query: 750 gacagattcacccgcgcctccgaacccgacgacgctttgaatcctctgtgtgcggtcgcc 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gacagattcacccgcgcctctgaacccgacgacgctttgaatcctctgtgtgcggtcgcc 837
Query: 810 aagagttc 817
||||||||
Sbjct: 838 aagagttc 845
Score = 464 bits (234), Expect = e-130
Identities = 261/270 (96%)
Strand = Plus / Plus
Query: 119 aggtctcggacgacatgaactgacatcagcggcgagaggagctctcttaggagagacgcc 178
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 aggtctcggacgacatgaactgacatcagcggcgagaggagctctgttaggagagacgcc 443
Query: 179 cgtggacagcgcagaacacacacaacgcaaggagccggagccgcaggccgcgtctgacac 238
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 cgtggacagcgcagaacacacacaacgcaaggagccgggaccgcaggccgcgtctgacac 503
Query: 239 gaagatagttggaatagttacagacatcaccgtcccgccggacgccggggagctgaatta 298
||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 504 gaagatagtcgaaatagttacagacatgaccgtcccgccggacgccagggagctgaatta 563
Query: 299 catatcgataaaaaatacagacaaatccaatctgaaggttttcaagccgttcgccagcga 358
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 catatcgataaaaaacacagacaaatccaatctgaaggtgttcaagccgttcgccagcga 623
Query: 359 ccctcagaagcagctgagatatgagaggta 388
||||||||||||||||||||||||||||||
Sbjct: 624 ccctcagaagcagctgagatatgagaggta 653
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,392
Number of extensions: 19821
Number of successful extensions: 19821
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19821
Number of HSP's successfully gapped: 2
Length of query: 2278
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2261
Effective length of database: 8,119,229
Effective search space: 18357576769
Effective search space used: 18357576769
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)