BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20020 (UTR included)
(2020 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3016_C1 1431 0.0
>BF14_3016_C1
Length = 1122
Score = 1431 bits (722), Expect = 0.0
Identities = 731/734 (99%)
Strand = Plus / Plus
Query: 403 caaatgcttttcttatttttctttgatatgcgatcgtttagttgacagtttttaaatata 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaatgcttttcttatttttctttgatatgcgatcgtttagttgacagtttttaaatata 60
Query: 463 agtggtgttttcggtgtgtttataatcttaacactaaaatgagcgctccgataatcataa 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtggtgttttcggtgtgtttataatcttaacactaaaatgagcgctccgataatcataa 120
Query: 523 ctgtgcctaataattatctggcggtggacgatgtggagtcgaaggtggttctcgatgtgt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtgcctaataattatctggcggtggacgatgtggagtcgaaggtggttctcgatgtgt 180
Query: 583 ctcctagtccaccgtccaggaaaaggaggctggaccatctaacatgggaagaaaagatgc 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcctagtccaccgtccaggaaaaggaggctggaccatctaacatgggaagaaaagatgc 240
Query: 643 aaaggaagaaactcaagaacagagttgcagctcagacatcgcgcgaccggaagaaggcga 702
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 aaagaaagaaactcaagaacagagttgcagctcagacatcgcgggaccggaagaaggcga 300
Query: 703 agatggatgaaatggagggtcgtatcaagcacttcatggacttaaacgagcggcttcttg 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agatggatgaaatggagggtcgtatcaagcacttcatggacttaaacgagcggcttcttg 360
Query: 763 gtgaggtggagaacctaaaggcgatgaacgagcggcttctgagtgagaactcagccctgc 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgaggtggagaacctaaaggcgatgaacgagcggcttctgagtgagaactcagccctgc 420
Query: 823 gcgaggcggcgaggagcgtcgcggtggccccgagaccagcagagtctcatcctcagcaga 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgaggcggcgaggagcgtcgcggtggccccgagaccagcagagtctcatcctcagcaga 480
Query: 883 aggtggggcccctgtcggcactcaacgcggctcgtctagtgatgctgatgtatgtgctct 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggtggggcccctgtcggcactcaacgcggctcgtctagtgatgctgatgtatgtgctct 540
Query: 943 ctcagaactcctgcaacacttggactcccccgagtatttggacaccctccaccaacttgc 1002
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 541 ctcagaactcctgcaacacttggactcccccgagtatttggacacactccaccaacttgc 600
Query: 1003 agatcaattactccaagaaattgatggaaaaactgcaggagaagctgccgatgataaagc 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agatcaattactccaagaaattgatggaaaaactgcaggagaagctgccgatgataaagc 660
Query: 1063 cagcagcaatagacattgtcctgaaagaaatgaagtggtggggtccacagcagaacaatt 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagcagcaatagacattgtcctgaaagaaatgaagtggtggggtccacagcagaacaatt 720
Query: 1123 ggaatcctgtcaaa 1136
||||||||||||||
Sbjct: 721 ggaatcctgtcaaa 734
Score = 617 bits (311), Expect = e-176
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 1137 acagacactattaaagaagaaaacggggacaagggtgacttattctatgcaagctacgaa 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 acagacactattaaagaagaaaacggggacaagggtgacttattctatgcaagctacgaa 871
Query: 1197 gcaaatgattgtgtgacaattgaagttccttgcgaggaacaaacagaagaatcggctcca 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gcaaatgattgtgtgacaattgaagttccttgcgaggaacaaacagaagaatcggctcca 931
Query: 1257 ataaaattggacactgattttaataaatttacggacgactgtttggatgtcacattggaa 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ataaaattggacactgattttaataaatttacggacgactgtttggatgtcacattggaa 991
Query: 1317 tctgatatgaagttattgtcacctctgcctatgtcaataaaatctgtggatgaaaatgta 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 tctgatatgaagttattgtcacctctgcctatgtcaataaaatctgtggatgaaaatgta 1051
Query: 1377 ttggcagtgtccccgtcacacagtaacttgagctctgacatgggctacgagtcactctcc 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 ttggcagtgtccccgtcacacagtaacttgagctctgacatgggctacgagtcactctcc 1111
Query: 1437 tccccgctcag 1447
|||||||||||
Sbjct: 1112 tccccgctcag 1122
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,004
Number of extensions: 4282
Number of successful extensions: 4282
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4280
Number of HSP's successfully gapped: 2
Length of query: 2020
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2003
Effective length of database: 8,119,229
Effective search space: 16262815687
Effective search space used: 16262815687
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)