BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20022 (UTR included)
(2194 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B1D09 1433 0.0
BF01050A2A10 773 0.0
>BF01049B1D09
Length = 766
Score = 1433 bits (723), Expect = 0.0
Identities = 747/755 (98%)
Strand = Plus / Plus
Query: 331 atatcgacgtttataaattgtatcgaaagagtttattgaatttgtgagaattttcctttt 390
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12 atatcgacgtttataaattgtatcgaaagagtttattgaatttgttagaattttcctttt 71
Query: 391 tacctatcgcattcataattgcacattttttaatacaatagggcatattttcaaatatgg 450
|| ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||
Sbjct: 72 taactatcgcattcataattgcacatttttaaatacaatagcgcatattatcaaatatgg 131
Query: 451 cttctacgagtacagattcacagtctacaatcgctcagaagtcatgggtgatggcaaata 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cttctacgagtacagattcacagtctacaatcgctcagaagtcatgggtgatggcaaata 191
Query: 511 atattgaaactgtgtctagtgttgatgatatttatcgatacgacaaaaaacaacagcaag 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atattgaaactgtgtctagtgttgatgatatttatcgatacgacaaaaaacaacagcaag 251
Query: 571 atatcttagctgctaaaccctgggagaaagacccccatttcttcaaagacatcaaaatct 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atatcttagctgctaaaccctgggagaaagacccccatttcttcaaagacatcaaaatct 311
Query: 631 cagcgctagcattacttaaaatggttatgcacgctcgttctggaggaacattagaagtta 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagcgctagcattacttaaaatggttatgcacgctcgttctggaggaacattagaagtta 371
Query: 691 tgggacttctgcttggtaaggttgatgcaaacacaatgttagtaatggactcatttgctt 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgggacttctgcttggtaaggttgatgcaaacacaatgttagtaatggactcatttgctt 431
Query: 751 tgcccgttgaagggacagagacaagggtaaacgctcaggcacaggcctatgagtatatga 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgcccgttgaagggacagagacaagggtaaacgctcaggcacaggcctatgagtatatga 491
Query: 811 cggcatacatagaggcagctaaacaggttggtagacatgagaatgccataggttggtacc 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cggcatacatagaggcagctaaacaggttggtagacatgagaatgccataggttggtacc 551
Query: 871 acagtcatcctggttatggttgttggttgtctggcatcgatgtctccacacagatgctca 930
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 552 acagtcaccctggttatggttgttggttgtctggcatcgatgtctccacacagatgctta 611
Query: 931 accagaacttccaagagccatttgtagccattgtcatagatcccgtcagaacaatctcag 990
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 612 accagaacttccaagagccatttgtagccattgtcatagatcccgtcaggacaatctcag 671
Query: 991 ccggcaaggtttgcctcggagcttttagaacttatcccaagggttacaaaccagcgaacg 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccggcaaggtttgcctcggagcttttagaacttatcccaagggttacaaaccagcgaacg 731
Query: 1051 aagagccatcggaatatcagaccataccgttgaat 1085
|||||||||||||||||||||||||||||||||||
Sbjct: 732 aagagccatcggaatatcagaccataccgttgaat 766
>BF01050A2A10
Length = 849
Score = 773 bits (390), Expect = 0.0
Identities = 406/410 (99%), Gaps = 1/410 (0%)
Strand = Plus / Minus
Query: 1785 cgcttacattaaataaggacattccaaacagtagtatgggtatcaacattacattgcttc 1844
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 cgcttacataaaa-aaggacattccaaacagtagtatgggtatcaacattacattgcttc 791
Query: 1845 gtgatgacattaaattatttacattgtcacagattaaaaatatataatcgcttacaggaa 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gtgatgacattaaattatttacattgtcacagattaaaaatatataatcgcttacaggaa 731
Query: 1905 cgtcactacactagaatatgatggaatagaagctataaagaaatctcaaaataaagtcta 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 cgtcactacactagaatatgatggaatagaagctataaagaaatctcaaaataaagtcta 671
Query: 1965 gtcttaataaaaggtatgagctacacgtagcgacagaaccacagggactgagctttgaca 2024
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 670 gtcttaataaaaggtatgagctacacgtagcgacagaacaacagggactgagctttgaca 611
Query: 2025 ctcctcaatttagtttaaaccggcatagcttattgtttcattgttattattaagtacata 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctcctcaatttagtttaaaccggcatagcttattgtttcattgttattattaagtacata 551
Query: 2085 accacataatacatcttccgttatttactatacatatacatatgttacagttcgttatgt 2144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 accacataatacatcttccgttatttactatacatatacatatgttacagttcgttatgt 491
Query: 2145 acagagcgggacagggatctcatataactccatacaaaataatatattat 2194
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 490 acagagcgggacagggatcttatataactccatacaaaataatatattat 441
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,846
Number of extensions: 4024
Number of successful extensions: 4024
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4024
Number of HSP's successfully gapped: 2
Length of query: 2194
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2177
Effective length of database: 8,119,229
Effective search space: 17675561533
Effective search space used: 17675561533
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)