BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20028 (UTR included)
(1291 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1C05 1485 0.0
>BF01030A1C05
Length = 778
Score = 1485 bits (749), Expect = 0.0
Identities = 761/766 (99%)
Strand = Plus / Plus
Query: 2 cccaggagaatttaatgaagtgttcaatgatgtcagagtactgttaaataacgatacttt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 cccaggagaatttaatgaagtgttcaatgatgtcagagtactgttaaataacgatacttt 72
Query: 62 gctaaaagaaggagcgagcggagctttctcgcaatacaacagagatcagctcacgcccgt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gctaaaagaaggagcgagcggagctttctcgcaatacaacagagatcagctcacgcccgt 132
Query: 122 gcgtcttgaaggttctgagcttcacacgcttataaccgaccataatgacctcggtggagg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcgtcttgaaggttctgagcttcacacgcttataaccgaccataatgacctcggtggagg 192
Query: 182 taggtttttcgaccctcgttcaaaaagatcctttaaatacgaccatttgcgtaaggaagc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 taggtttttcgaccctcgttcaaaaagatcctttaaatacgaccatttgcgtaaggaagc 252
Query: 242 atccgattatgaacctcatgagcccgaccgtgaggcggaggcctggagagcagctttgga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atccgattatgaacctcatgagcccgaccgtgaggcggaggcctggagagcagctttgga 312
Query: 302 cgtggagctgacaaactatgtggccgaacattacaaacacggagcgagcttagtcgtggg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgtggagctgacaaactatgtggccgaacattacaaacacggagcgagcttagtcgtggg 372
Query: 362 ccgaaccctcgagaatggggccgtttctctcgtcgcctgcattgaggaccatcagtttca 421
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 373 ccgaaccctcgagaatggggccgtatctctcgtcgcctgcattgaggaccatcagtttca 432
Query: 422 gccgaaaaattactggaatggaagatggcgctccgtatggtctttaacagtagggggagg 481
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gccgaaaaattactggaacggaagatggcgctccgtatggtctttaacagtagggggagg 492
Query: 482 cgctgcagagctccgtggcatgctccgcgttcaggtgcactactacgaagacggcaacgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cgctgcagagctccgtggcatgctccgcgttcaggtgcactactacgaagacggcaacgt 552
Query: 542 ccagctcgttagttccaaagaggtccgcgcgagtctagcggctaccggcgaagcggctac 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccagctcgttagttccaaagaggtccgcgcgagtctagcggctaccggcgaagcggctac 612
Query: 602 cgccaaggaattcgtgaggtcggtttgtgacgcggagaacgcgtaccagacggcgatatc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgccaaggaattcgtgaggtcggtttgtgacgcggagaacgcgtaccagacggcgatatc 672
Query: 662 tgacaattacaagacaatgagtgacaccacgttcaaagcgctccgacgacagctcccggt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgacaattacaagacaatgagtgacaccacgttcaaagcgctccgacgacagctcccggt 732
Query: 722 gacccgcagtaagattgactggacgcggctggtgtcctacactatc 767
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gannngcagtaagattgactggacgcggctggtgtcctacactatc 778
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 112,946
Number of extensions: 1778
Number of successful extensions: 1778
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1778
Number of HSP's successfully gapped: 1
Length of query: 1291
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1274
Effective length of database: 8,119,229
Effective search space: 10343897746
Effective search space used: 10343897746
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)