BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20053 (UTR included)
(2419 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_827_C1 2991 0.0
>BF14_827_C1
Length = 1640
Score = 2991 bits (1509), Expect = 0.0
Identities = 1509/1509 (100%)
Strand = Plus / Minus
Query: 864 gaagaaatggaagagaaaatccgccttctgaacacttccactacagaagaggaaatcaat 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 gaagaaatggaagagaaaatccgccttctgaacacttccactacagaagaggaaatcaat 1569
Query: 924 acattagcagctaagcattttgaagctcagagccttgcaacaggtcggtgggactcacag 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 acattagcagctaagcattttgaagctcagagccttgcaacaggtcggtgggactcacag 1509
Query: 984 ctggatgccttgaaacacacacagagagcagagcaccgcacctggctcatgaatgctatc 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 ctggatgccttgaaacacacacagagagcagagcaccgcacctggctcatgaatgctatc 1449
Query: 1044 aatgaatatcagactgaggagaaaattactcccagcaactctcccctgtgttcgtacgcg 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 aatgaatatcagactgaggagaaaattactcccagcaactctcccctgtgttcgtacgcg 1389
Query: 1104 tcgctgccacccgcgccggccgctcccgccaccctgctggaggagagcttcaccatacac 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 tcgctgccacccgcgccggccgctcccgccaccctgctggaggagagcttcaccatacac 1329
Query: 1164 ctcggctctcaactcaaacaaacacacaacatcaggctcgtatgcgcagacatgttagac 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 ctcggctctcaactcaaacaaacacacaacatcaggctcgtatgcgcagacatgttagac 1269
Query: 1224 ctgtgcgcgcgagacaggaccgacggtggcctgtccctgagtctatactcgagcgagttg 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 ctgtgcgcgcgagacaggaccgacggtggcctgtccctgagtctatactcgagcgagttg 1209
Query: 1284 tcgggggcggtggtggtgtgcgagggtcggccgtcccgctcacccttgaccagtctgccg 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 tcgggggcggtggtggtgtgcgagggtcggccgtcccgctcacccttgaccagtctgccg 1149
Query: 1344 cgagtcaccgaccatcacttccccgacttgcacgaccagctgagacgaatagaggaggcg 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 cgagtcaccgaccatcacttccccgacttgcacgaccagctgagacgaatagaggaggcg 1089
Query: 1404 gtcgccgacccggcggagacacgcaacagaagccgcggcgagcgcgagtcgcggcggcgg 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 gtcgccgacccggcggagacacgcaacagaagccgcggcgagcgcgagtcgcggcggcgg 1029
Query: 1464 gcgctgcgagcgggggacgtgttcgtgacgaggcacagcaacctgtcccagcatgtggtg 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 gcgctgcgagcgggggacgtgttcgtgacgaggcacagcaacctgtcccagcatgtggtg 969
Query: 1524 ttccacctggtggcggacgaggacgagctgcgctcggccgagctgagctcgcggcaccgc 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 ttccacctggtggcggacgaggacgagctgcgctcggccgagctgagctcgcggcaccgc 909
Query: 1584 gccgtgctggggctgcgcgaggtgctgctcgcggcgcagcggaacgacgtagccagcgtg 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gccgtgctggggctgcgcgaggtgctgctcgcggcgcagcggaacgacgtagccagcgtg 849
Query: 1644 gcgctgccgctgctactgcggcgcgagctgggcgaggatgccacggctgcctggtgcctg 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gcgctgccgctgctactgcggcgcgagctgggcgaggatgccacggctgcctggtgcctg 789
Query: 1704 cgtcgcgccgagctcgtgctcaaatgcgtcaaggggttcgtgctggaggcgagcgcggcg 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 cgtcgcgccgagctcgtgctcaaatgcgtcaaggggttcgtgctggaggcgagcgcggcg 729
Query: 1764 ggcggcgcgcgccttaagacgcttacggccgccgtaccgcgggaggcgcgcgctctgttc 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ggcggcgcgcgccttaagacgcttacggccgccgtaccgcgggaggcgcgcgctctgttc 669
Query: 1824 cccgccctggccgcactgctgcccgcagtgttccgcgtcgccgggccgctccggccgaga 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cccgccctggccgcactgctgcccgcagtgttccgcgtcgccgggccgctccggccgaga 609
Query: 1884 ctaccctcgcacgaagcgccacggccgagagtctagtgatgcacggcggcgtcaaacaaa 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctaccctcgcacgaagcgccacggccgagagtctagtgatgcacggcggcgtcaaacaaa 549
Query: 1944 gcacagcgcgagatggcgaacgtaccactaaactattgaattcaaattgtacatcgtgtc 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gcacagcgcgagatggcgaacgtaccactaaactattgaattcaaattgtacatcgtgtc 489
Query: 2004 ttgcagttcacagagcgtcttgcaatataataaaatgtgtataaaaattgtaatcatgat 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttgcagttcacagagcgtcttgcaatataataaaatgtgtataaaaattgtaatcatgat 429
Query: 2064 ggttaatcgaacgatgattgtataattatgtaaacattattaaatgcttctggcccggca 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggttaatcgaacgatgattgtataattatgtaaacattattaaatgcttctggcccggca 369
Query: 2124 cggcacggccgcccgcttccctgcctgcctctttccatccacgtgtcctcaacatcgtat 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cggcacggccgcccgcttccctgcctgcctctttccatccacgtgtcctcaacatcgtat 309
Query: 2184 aacaacatttataacttgtaacaacagctcctccgtcagtcgcgaccctaacgcctaacg 2243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aacaacatttataacttgtaacaacagctcctccgtcagtcgcgaccctaacgcctaacg 249
Query: 2244 cctacactcatattaaaatatactttgtacgaactcttataataaaattcctatcaaagg 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cctacactcatattaaaatatactttgtacgaactcttataataaaattcctatcaaagg 189
Query: 2304 atataactacgttaaaaaactagattattctaaaacgatgtcttcgctgagtttaaatcg 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atataactacgttaaaaaactagattattctaaaacgatgtcttcgctgagtttaaatcg 129
Query: 2364 acatatctg 2372
|||||||||
Sbjct: 128 acatatctg 120
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,395
Number of extensions: 5316
Number of successful extensions: 5316
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5316
Number of HSP's successfully gapped: 1
Length of query: 2419
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2402
Effective length of database: 8,119,229
Effective search space: 19502388058
Effective search space used: 19502388058
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)