BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20081 (UTR included)
(2515 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A1B08 728 0.0
>BF01055A1B08
Length = 811
Score = 728 bits (367), Expect = 0.0
Identities = 388/395 (98%)
Strand = Plus / Plus
Query: 2121 aaatgcaagttatgtgacaaattatgcataattgcaatgctgttaaatgtaaatacacat 2180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aaatgcaagttatgtgacaaattatgcataattgcaatgctgttaaatgtaaatacacat 63
Query: 2181 aaatatttttatgtatatatgtgaatgtgggttctaaagatgtatcatgctaagcatttc 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aaatatttttatgtatatatgtgaatgtgggttctaaagatgtatcatgctaagcatttc 123
Query: 2241 cccgactgtcttcgctttaaaattttgttttataagagatttaaccaaattaattctgat 2300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cccgactgtctttgctttaaaattttgttttataagagatttaaccaaattaattctgat 183
Query: 2301 acagcactcgttcatttaccataagtttgcattgttaaactaaatactaagagttgtcag 2360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 acagcactcgttcatttaccataagtttgcattgttaaactaaatactaagagttgtcag 243
Query: 2361 ttttacatttatatgtactgtcatgtgaagatttgtaaaatactggaaactgtatgtgtg 2420
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttttacatttattagtactgtcatgtgaagatttgtaaaatactggaaactgtatgtgtg 303
Query: 2421 tgaactagccctaagggtgagttagcaacaatcatatgttttcaatgaattcaaactgaa 2480
||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||
Sbjct: 304 tgaactagccctaagggtgagttagtaaaaatcatatgttttcaatgatttcaaactgaa 363
Query: 2481 atatctcttatttgattacttcattaataatattt 2515
||||||||||||||||||| |||||||||||||||
Sbjct: 364 atatctcttatttgattacatcattaataatattt 398
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,594
Number of extensions: 5346
Number of successful extensions: 5346
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5346
Number of HSP's successfully gapped: 1
Length of query: 2515
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2498
Effective length of database: 8,119,229
Effective search space: 20281834042
Effective search space used: 20281834042
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)