BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20085 (UTR included)
(5083 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1D10 1170 0.0
>BF01056A1D10
Length = 781
Score = 1170 bits (590), Expect = 0.0
Identities = 618/628 (98%)
Strand = Plus / Plus
Query: 3730 gcctagacgcgggctcccgtctctgcctgtctcagtgccgtcagctggagggcgggtcgg 3789
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 154 gcctggacgcgggctcccgtctctgcctgtctcagtgccgccagctggagggcgggtcgg 213
Query: 3790 agggcgcgtgtgtggcggtgtcggccgcgggcggggtcctagcgggggtcatctcgtacg 3849
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 214 agggcgcgtgtgtggcggtgtcggccgcgggcggagtcctagcgggggtcatctcgtacg 273
Query: 3850 ccactctgggggcttgtgtcgtcggctgggacctcagagcccccggtaacgcgtggaagc 3909
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ccactctgggggcttgtgttgtcggctgggacctcagagcccccggtaacgcgtggaagc 333
Query: 3910 tgcagggagatctcaagcagggcgtgtacacatgcctgtacgctaacagctccggttaca 3969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgcagggagatctcaagcagggcgtgtacacatgcctgtacgctaacagctccggttaca 393
Query: 3970 ttgccgtgggcacctccagcggggcggtgtgtgtctgggacctgaggttcagtctgccga 4029
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcgccgtgggcacctccagcggggcggtgtgtgtctgggacctgaggttcagtctgccga 453
Query: 4030 tcacgtccgtcaagcatccgaactctgagcgtatccgtcgtatcgtgggcagcggtggtc 4089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcacgtccgtcaagcatccgaactctgagcgtatccgtcgtatcgtgggcagcggtggtc 513
Query: 4090 gccgtgtgtgggcggtgggcgggcgggacgcggcctcgtggtgcctggagtccactcaga 4149
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gccgagtgtgggcggtgggcgggcgggacgcggcctcgtggtgcctggagtccactcaga 573
Query: 4150 ggacccacgcgctgtggcccttcaccgcctcccagcaaccgctgaactacgaacatgcgt 4209
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 574 ggacccacgcgctgtggcccttcaccgcctcccagcaaccgttgaactacgaacatgcgt 633
Query: 4210 cgtcccactacatatcgagcgcgtactgcggcacccgcgacgggagccggttcgtggtga 4269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cgtcccactacatatcgagcgcgtactgcggcacccgcgacgggagccggttcgtggtga 693
Query: 4270 ccggcggctccgaccagaggctgaggctgtgggacctgcagcacgccgaggactcgcacg 4329
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ccggcggctccgaccagnnactgaggctgtgggacctgcagcacgccgaggactcgcacg 753
Query: 4330 tgctgctgcacgctcacaacgagcacat 4357
||||||||||||||||||||||||||||
Sbjct: 754 tgctgctgcacgctcacaacgagcacat 781
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 505,098
Number of extensions: 10326
Number of successful extensions: 10326
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10326
Number of HSP's successfully gapped: 1
Length of query: 5083
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5065
Effective length of database: 8,109,745
Effective search space: 41075858425
Effective search space used: 41075858425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)