BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20093 (UTR included)
(2521 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1D09 940 0.0
BF14_2253_C1 720 0.0
BF01042B1D05 387 e-107
>BF01034B1D09
Length = 790
Score = 940 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 1217 gcggttgatggaacagaatcttgcgcagaaagagagggaattggagatgagggaaataga 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggttgatggaacagaatcttgcgcagaaagagagggaattggagatgagggaaataga 60
Query: 1277 cctggccgccagggaattacacatactgatagtggccagtaacatgtcgcatacacaacc 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctggccgccagggaattacacatactgatagtggccagtaacatgtcgcatacacaacc 120
Query: 1337 gccgcagcccaacaagagaaagggcaaatttcacaagatgaagttactgaaaaaggacac 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgcagcccaacaagagaaagggcaaatttcacaagatgaagttactgaaaaaggacac 180
Query: 1397 gatctcatctccactggactttaggcacacgttaacagttcggcagtcggacgacgagtc 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatctcatctccactggactttaggcacacgttaacagttcggcagtcggacgacgagtc 240
Query: 1457 cagtgttaaacaactcgtagcagtcgctaaggacacgccgccagggtcgccagccattat 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagtgttaaacaactcgtagcagtcgctaaggacacgccgccagggtcgccagccattat 300
Query: 1517 gagacccatcgttttgccagcggacggagtgaaagggaaaacttggggtccatcgacggg 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagacccatcgttttgccagcggacggagtgaaagggaaaacttggggtccatcgacggg 360
Query: 1577 tcaccaacgggctcgagcacatctaccgctgccggcgctcagacctcgcgcccaccgacc 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaccaacgggctcgagcacatctaccgctgccggcgctcagacctcgcgcccaccgacc 420
Query: 1637 atccacctctgccccgcatctaccaccgcacgcacctcgcgcgcctcatccagg 1690
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atccacctctgccccgcatctaccaccgcacgcacctcgcgcgcctcatccagg 474
>BF14_2253_C1
Length = 1176
Score = 720 bits (363), Expect = 0.0
Identities = 366/367 (99%)
Strand = Plus / Plus
Query: 1997 cgccgagctgctccgggacgagtgacaaacgctaataaaataaacacgactcgaagttta 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgccgagctgctccgggacgagtgacaaacgctaataaaataaacacgactcgaagttta 61
Query: 2057 gacatacattatacagggtgtgtaggttgtcctcatagagccaccgaggctcgcgcacgc 2116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gacatacattatacagggtgtgtaggttgtcctcatagagccaccgaggctcgcgcacgc 121
Query: 2117 cgaccgtacaaatgtgttgccatattaaatacatatcccgtaatgacattccgtgtttgc 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgaccgtacaaatgtgttgccatattaaatacatatcccgtaatgacattccgtgtttgc 181
Query: 2177 atttcaaaacgtctgccatattattttctggatccaatacacgaaacggagctcgtcccc 2236
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 182 atttcaaaacgtctgccatatttttttctggatccaatacacgaaacggagctcgtcccc 241
Query: 2237 aacactcacatgtatatagtaaagtttccaggatttgaatgcttatgttaagtttagtta 2296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacactcacatgtatatagtaaagtttccaggatttgaatgcttatgttaagtttagtta 301
Query: 2297 agtaggacgaaaaaaaaataaaaaaagacttatatttgttaggttagctaggtcgagtta 2356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtaggacgaaaaaaaaataaaaaaagacttatatttgttaggttagctaggtcgagtta 361
Query: 2357 gttataa 2363
|||||||
Sbjct: 362 gttataa 368
Score = 250 bits (126), Expect = 9e-66
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 2396 gcggctcggggacgtgcggatgtggtccgtaacaatctgttcacagatatcatgaagcag 2455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gcggctcggggacgtgcggatgtggtccgtaacaatctgttcacagatatcatgaagcag 483
Query: 2456 tagtttgtaaggtgtatgaatttgttcgcatttatctcactagctgtaaggttgtattcg 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tagtttgtaaggtgtatgaatttgttcgcatttatctcactagctgtaaggttgtattcg 543
Query: 2516 atacta 2521
||||||
Sbjct: 544 atacta 549
>BF01042B1D05
Length = 705
Score = 387 bits (195), Expect = e-107
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1687 cagggcttataacgataaacgcgatcgaggaaacgaagcgcaaaccgcgcaagtcgaaat 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cagggcttataacgataaacgcgatcgaggaaacgaagcgcaaaccgcgcaagtcgaaat 570
Query: 1747 cacaagtacgcgcgcccaaggccgagatagcgaagaagaggtcgggcagtcacgacgacc 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cacaagtacgcgcgcccaaggccgagatagcgaagaagaggtcgggcagtcacgacgacc 630
Query: 1807 tgctcgacgccgagcccaggaggaacaagttctttatgtgtcccatgttcacgcccgagc 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgctcgacgccgagcccaggaggaacaagttctttatgtgtcccatgttcacgcccgagc 690
Query: 1867 tgccccaccactacg 1881
|||||||||||||||
Sbjct: 691 tgccccaccactacg 705
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,354
Number of extensions: 3412
Number of successful extensions: 3412
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3412
Number of HSP's successfully gapped: 4
Length of query: 2521
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2504
Effective length of database: 8,119,229
Effective search space: 20330549416
Effective search space used: 20330549416
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)