BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20095 (UTR included)
(1168 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 250 4e-66
BF01056B1D02 248 2e-65
BF01052B1H02 206 6e-53
BF01031B1E12 186 5e-47
BF01037B1H08 159 1e-38
BF01040A1G09 151 3e-36
BF01010B2F09 143 7e-34
BF01062A1A05 127 4e-29
BF01029B2F12 100 1e-20
>BF01023A2A12
Length = 723
Score = 250 bits (126), Expect = 4e-66
Identities = 183/202 (90%)
Strand = Plus / Minus
Query: 965 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 1024
||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||
Sbjct: 345 atcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatggaga 286
Query: 1025 aggttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaatcttataat 1084
|||||||||||||||||||||| || ||||||| | |||| |||||||| ||||||||
Sbjct: 285 aggttagagcattaatcaccacgctcgctcaaggctgattggtgatttcaaacttataat 226
Query: 1085 ttgaaattataagaccaggttttctcactatgtttttcttcacagtccgtcagtggtgtc 1144
|||||||||||||||||||||| ||||| | ||| | |||||| ||||||||||||||||
Sbjct: 225 ttgaaattataagaccaggtttcctcacgacgttctccttcaccgtccgtcagtggtgtc 166
Query: 1145 taaatactcttagaaaatacat 1166
|||||||| ||||||| |||||
Sbjct: 165 taaatactgttagaaagtacat 144
>BF01056B1D02
Length = 778
Score = 248 bits (125), Expect = 2e-65
Identities = 185/204 (90%), Gaps = 7/204 (3%)
Strand = Plus / Minus
Query: 965 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 1024
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 743 atcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatg---a 687
Query: 1025 aggttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaatcttataat 1084
||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 686 aggttagagcattaaccaccacgcttgctcaagacgggttggcgatttcaatcttataat 627
Query: 1085 ttgaaattataagaccaggttttctcactatgtttttcttcacagtccgtcagtggtgtc 1144
|||||||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||
Sbjct: 626 ttgaaattataagaccaggtttcctcacgacgttttccttca----ccgtcagtggtgtc 571
Query: 1145 taaatactcttagaaaatacatat 1168
||| ||| |||||||| |||||||
Sbjct: 570 taactacccttagaaagtacatat 547
>BF01052B1H02
Length = 790
Score = 206 bits (104), Expect = 6e-53
Identities = 170/192 (88%)
Strand = Plus / Plus
Query: 965 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 1024
|||| |||||| |||| || |||||||||| |||||||| |||| ||||| ||||||||
Sbjct: 266 atcaccatcattagcccatcagagcccactgttgagcaaacgccttttctcccatggaga 325
Query: 1025 aggttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaatcttataat 1084
| ||||||||||||| |||||| ||||||||||||| |||||||||||||| || || ||
Sbjct: 326 aagttagagcattaagcaccacgcttgctcaagacgggttggcgatttcaaactaattat 385
Query: 1085 ttgaaattataagaccaggttttctcactatgtttttcttcacagtccgtcagtggtgtc 1144
|| ||||||||||||||||||| ||||| ||||||| |||||| |||||||||| |||||
Sbjct: 386 ttcaaattataagaccaggtttcctcacgatgttttccttcaccgtccgtcagtagtgtc 445
Query: 1145 taaatactctta 1156
||||||||||||
Sbjct: 446 taaatactctta 457
>BF01031B1E12
Length = 730
Score = 186 bits (94), Expect = 5e-47
Identities = 162/182 (89%), Gaps = 2/182 (1%)
Strand = Plus / Minus
Query: 967 catcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggagaag 1026
||||||||| ||||||| |||||||||||||||||||| || ||||||||| |||||||
Sbjct: 216 catcatcataagcctatcggagcccactgctgagcaaatccc-cttctcacacggagaag 158
Query: 1027 gttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaatcttataattt 1086
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 157 gttagagcattaatcaccacgcttgctcaagacgggttggcgatttcaatcttatacttt 98
Query: 1087 g-aaattataagaccaggttttctcactatgtttttcttcacagtccgtcagtggtgtct 1145
| ||| |||||||||||||| ||||| ||||||| | |||| ||| ||||||||| ||
Sbjct: 97 gctaatcataagaccaggtttcctcacgatgttttccctcaccgtctctcagtggtgcct 38
Query: 1146 aa 1147
||
Sbjct: 37 aa 36
>BF01037B1H08
Length = 758
Score = 159 bits (80), Expect = 1e-38
Identities = 104/112 (92%)
Strand = Plus / Minus
Query: 965 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 1024
||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| |||
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtaga 290
Query: 1025 aggttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaat 1076
||||||||||||||| |||||| ||||||||||||| | |||||||||||||
Sbjct: 289 aggttagagcattaagcaccacgcttgctcaagacggggtggcgatttcaat 238
>BF01040A1G09
Length = 753
Score = 151 bits (76), Expect = 3e-36
Identities = 115/128 (89%)
Strand = Plus / Minus
Query: 965 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 1024
||||||||||||||||||| ||| ||||||||||||| | |||||||||| ||||||||
Sbjct: 137 atcatcatcatcagcctatcggaagccactgctgagcataagcctcttctcgcatggaga 78
Query: 1025 aggttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaatcttataat 1084
||||| |||||||||| |||| ||||||||||| | |||||||||||||| ||||||||
Sbjct: 77 aggtttaagcattaatcgccacgcttgctcaagatgggttggcgatttcaaacttataat 18
Query: 1085 ttgaaatt 1092
||||||||
Sbjct: 17 ttgaaatt 10
>BF01010B2F09
Length = 764
Score = 143 bits (72), Expect = 7e-34
Identities = 173/204 (84%), Gaps = 7/204 (3%)
Strand = Plus / Plus
Query: 965 atcatcatcatcagcctataggagcccactgctgagcaaaggcctcttctcacatggaga 1024
|||||||||| |||||| | ||||||| | |||||| |||| ||||||||||||||||
Sbjct: 262 atcatcatcaccagcctgtcggagcccgccgctgag---aggcgtcttctcacatggaga 318
Query: 1025 aggttagagcattaatcaccacacttgctcaagacgtgttggcgatttcaatcttataat 1084
|||||||||||||||||||||| || |||||||||| |||||||||| ||| |||||||
Sbjct: 319 aggttagagcattaatcaccacgctcgctcaagacggattggcgattttaattttataat 378
Query: 1085 ttgaaattataagaccaggttttctcactatgtttttcttcacagtccgtcagtggtgtc 1144
|| |||| || |||||||| ||| || || | |||||| |||||||||||| |||
Sbjct: 379 tt-ttattacaaatccaggtttcctc---atattctccttcaccgtccgtcagtggcgtc 434
Query: 1145 taaatactcttagaaaatacatat 1168
|||||||||||||||| |||||||
Sbjct: 435 taaatactcttagaaagtacatat 458
>BF01062A1A05
Length = 777
Score = 127 bits (64), Expect = 4e-29
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 983 taggagcccactgctgagcaaaggcctcttctcacatggagaaggttagagcattaatca 1042
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 588 taggagcccactgctaagcaaaggcctcttctcacaaggagaaggttagagcattaatca 529
Query: 1043 ccacacttgctcaaga 1058
|||| |||||||||||
Sbjct: 528 ccacgcttgctcaaga 513
>BF01029B2F12
Length = 749
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1091 ttataagaccaggttttctcactatgtttttcttcacagtccgtcagtggtgtctaaata 1150
|||||||||||||||| ||| | |||| || |||||| ||||||||||||||||||||||
Sbjct: 543 ttataagaccaggtttcctcgcgatgtcttccttcaccgtccgtcagtggtgtctaaata 602
Query: 1151 ctcttagaaaatacatat 1168
|||||||||| |||||||
Sbjct: 603 ctcttagaaagtacatat 620
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,192
Number of extensions: 5979
Number of successful extensions: 5979
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 5975
Number of HSP's successfully gapped: 10
Length of query: 1168
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1151
Effective length of database: 8,119,229
Effective search space: 9345232579
Effective search space used: 9345232579
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)