BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20117 (UTR included)
(1690 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H02 910 0.0
BF01020B2F11 369 e-101
>BF01047B2H02
Length = 633
Score = 910 bits (459), Expect = 0.0
Identities = 478/483 (98%), Gaps = 1/483 (0%)
Strand = Plus / Plus
Query: 457 aggattgatatcatataaattggttttcaataaaaggattcatcatgcatcgtgcaaagt 516
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 95 aggattgatatcatataaattggttttcaataaaaggattcattatgcatcgtgcaaagt 154
Query: 517 tagtgcttcaggctacaaataaaatcggcaacagtgaaagatttgcatcatggctcctca 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tagtgcttcaggctacaaataaaatcggcaacagtgaaagatttgcatcatggctcctca 214
Query: 577 acaaaccccagacggcggccgtgatggtgaacaaccaaaggctgaagagttcaacggcag 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 acaaaccccagacggcggccgtgatggtgaacaaccaaaggctgaagagttcaacggcag 274
Query: 637 cagagcctttcttgaacggttcaagttcagcatatgt-ggagactatgtacaatgcctgg 695
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 275 cagagcctttcttgaacggttcaagttcagcatatgttggagactatgtacaatgcctgg 334
Query: 696 ctgtcagatcctaactcggtgcatgcgtcttgggacgcgttcttccgcaacgccacaaat 755
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 335 ctgtcagatcctaactcggtgcatgcgtcttgggacgcgttcttccgcaacgccacgaat 394
Query: 756 ggcgcccagcccggggtcgcatacacgtctccaccgaatctagccccgtactccaagaac 815
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 395 ggcgcccagcccggggtcgcatacacgtcaccaccgaatctagccccgtacgccaagaac 454
Query: 816 gaagtccccttgacctccctggtaccagcggctggcatgccctcgatatcagcaggttca 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gaagtccccttgacctccctggtaccagcggctggcatgccctcgatatcagcaggttca 514
Query: 876 cccatcaacgagaaaatcatcgacgaccatctggcggtgcaggctatcatcagaagctac 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cccatcaacgagaaaatcatcgacgaccatctggcggtgcaggctatcatcagaagctac 574
Query: 936 cag 938
|||
Sbjct: 575 cag 577
>BF01020B2F11
Length = 816
Score = 369 bits (186), Expect = e-101
Identities = 189/190 (99%)
Strand = Plus / Plus
Query: 712 cggtgcatgcgtcttgggacgcgttcttccgcaacgccacaaatggcgcccagcccgggg 771
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11 cggtgcatgcgtcttgggacgcgttcttccgcaacgccacgaatggcgcccagcccgggg 70
Query: 772 tcgcatacacgtctccaccgaatctagccccgtactccaagaacgaagtccccttgacct 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcgcatacacgtctccaccgaatctagccccgtactccaagaacgaagtccccttgacct 130
Query: 832 ccctggtaccagcggctggcatgccctcgatatcagcaggttcacccatcaacgagaaaa 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccctggtaccagcggctggcatgccctcgatatcagcaggttcacccatcaacgagaaaa 190
Query: 892 tcatcgacga 901
||||||||||
Sbjct: 191 tcatcgacga 200
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,212
Number of extensions: 9925
Number of successful extensions: 9925
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9924
Number of HSP's successfully gapped: 2
Length of query: 1690
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1673
Effective length of database: 8,119,229
Effective search space: 13583470117
Effective search space used: 13583470117
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)