BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20119 (UTR included)
(2449 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B1B02 1560 0.0
>BF01014B1B02
Length = 799
Score = 1560 bits (787), Expect = 0.0
Identities = 796/799 (99%)
Strand = Plus / Plus
Query: 444 attgtgttcaaatgatataaaacgactaaaaataattttttcaaccctaaagtcataatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgtgttcaaatgatataaaacgactaaaaataattttttcaaccctaaagtcataatg 60
Query: 504 tataaaattacctcaagactcctgagtatttcaaaggatattgcaattttatcaccaggt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataaaattacctcaagactcctgagtatttcaaaggatattgcaattttatcaccaggt 120
Query: 564 ttcaagaaaattaacagtgtatatgtatgcagtacaggaaaagttaattttcaaacattt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcaagaaaattaacagtgtatatgtatgcagtacaggaaaagttaattttcaaacattt 180
Query: 624 tacagtcgaaataatcaaaacgattacgaacgattgagacaaaatttaaataaaaagtta 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacagtcgaaataatcaaaacgattacgaacgattgagacaaaatttaaataaaaagtta 240
Query: 684 atatattcagttttgattggcgttgtagcctattcttcgtataaggtttggaatcaatac 743
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatattcagttttgtttggcgttgtagcctattcttcgtataaggtttggaatcaatac 300
Query: 744 aaagtaattccaattataacagcagctgaacaaatagaagaaacagaatctgatgctgaa 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagtaattccaattataacagcagctgaacaaatagaagaaacagaatctgatgctgaa 360
Query: 804 gttgataaaagaaagaaaagatacaaaaaggaaaaaattggtttcagagacaggaagatt 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgataaaagaaagaaaagatacaaaaaggaaaaaattggtttcagagacaggaagatt 420
Query: 864 atagaatatgagaatcgaatgagatcttattctactccagataaaatattcagatatttt 923
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagaatatgagaatcgtatgagatcttattctactccagataaaatattcagatatttt 480
Query: 924 gctactgtcaaattaacgtttggtgaaaatacagaagtctatatgacccccgacgatttc 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctactgtcaaattaacgtttggtgaaaatacagaagtctatatgacccccgacgatttc 540
Query: 984 ttgagagccatcactcccggcatgaaacaacctgatggcttgggcttggatcagtacaga 1043
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgagagccatcactcctggcatgaaacaacctgatggcttgggcttggatcagtacaga 600
Query: 1044 agatatgatcccaagactgtaagtcatcgcctcaacttggatctcgacgaggactcaatt 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agatatgatcccaagactgtaagtcatcgcctcaacttggatctcgacgaggactcaatt 660
Query: 1104 ttttacaagctgggctcgtctggtctcataactttcagcgattacatctttttgctgact 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttttacaagctgggctcgtctggtctcataactttcagcgattacatctttttgctgact 720
Query: 1164 gtactatcaacttcccgtcgtcatttcgagatcgcgttccgtatgtttgatctgaacggt 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtactatcaacttcccgtcgtcatttcgagatcgcgttccgtatgtttgatctgaacggt 780
Query: 1224 gacggtgatgttgactgtg 1242
|||||||||||||||||||
Sbjct: 781 gacggtgatgttgactgtg 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 346,716
Number of extensions: 7715
Number of successful extensions: 7715
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7715
Number of HSP's successfully gapped: 1
Length of query: 2449
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2432
Effective length of database: 8,119,229
Effective search space: 19745964928
Effective search space used: 19745964928
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)