BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20122 (UTR included)
(1648 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_855_C1 1142 0.0
BF01033B1H10 581 e-165
>BF14_855_C1
Length = 1009
Score = 1142 bits (576), Expect = 0.0
Identities = 579/580 (99%)
Strand = Plus / Plus
Query: 860 ccacaagccgacggtgatgtacgacccggccaagtcggagacctaccgcgtgctgcagga 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccacaagccgacggtgatgtacgacccggccaagtcggagacctaccgcgtgctgcagga 489
Query: 920 acagagcctcggagacaacgtcagcgaggtgccctcgcccgccacacagatcttcacgcc 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 acagagcctcggagacaacgtcagcgaggtgccctcgcccgccacacagatcttcacgcc 549
Query: 980 gccagtcgctaagcagaagccggtgccacccaaaccaatgaaacaatcagaggctcaacc 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gccagtcgctaagcagaagccggtgccacccaaaccaatgaaacaatcagaggctcaacc 609
Query: 1040 aagcggcaagcaaaccacttttgtgaattccctacaggaagagcatatccagcagtcaaa 1099
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aagcggcaagcaaacgacttttgtgaattccctacaggaagagcatatccagcagtcaaa 669
Query: 1100 ctcatttaagcggctcatgtaccacgtgctcggagaaaccgagttttagatcaataaaac 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ctcatttaagcggctcatgtaccacgtgctcggagaaaccgagttttagatcaataaaac 729
Query: 1160 taaacaatacagggttttatcaatacgaatgtattaaataaaacatctgctatgacgtac 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 taaacaatacagggttttatcaatacgaatgtattaaataaaacatctgctatgacgtac 789
Query: 1220 gactgtcagaaacttaaaggaagattggaattgcggggtgaataaccataagactaacca 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gactgtcagaaacttaaaggaagattggaattgcggggtgaataaccataagactaacca 849
Query: 1280 aaatttaataggatgaaatatttaatgctccttaaagtgtgttatttttcggtgtatttt 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aaatttaataggatgaaatatttaatgctccttaaagtgtgttatttttcggtgtatttt 909
Query: 1340 ctaatgctcgagtattagcaatattatttatgttaataataagtaggggagtaactttta 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ctaatgctcgagtattagcaatattatttatgttaataataagtaggggagtaactttta 969
Query: 1400 atactaagtgttgattatctgtttgtacagaaatattatt 1439
||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 atactaagtgttgattatctgtttgtacagaaatattatt 1009
>BF01033B1H10
Length = 795
Score = 581 bits (293), Expect = e-165
Identities = 302/306 (98%)
Strand = Plus / Plus
Query: 769 aggttgttcacaagcagttcaactcgccaatcaatctatactcggaccaaaacattgcca 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aggttgttcacaagcagttcaactcgccaatcaatctatactcggaccaaaacattgcca 549
Query: 829 attcgatcagacagcaaacatcgcctctgccccacaagccgacggtgatgtacgacccgg 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 attcgatcagacagcaaacatcgcctctgccccacaagccgacggtgatgtacgacccgg 609
Query: 889 ccaagtcggagacctaccgcgtgctgcaggaacagagcctcggagacaacgtcagcgagg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ccaagtcggagacctaccgcgtgctgcaggaacagagcctcggagacaacgtcagcgagg 669
Query: 949 tgccctcgcccgccacacagatcttcacgccgccagtcgctaagcagaagccggtgccac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tgccctcgcccgccacacagatcttcacgccgccagtcgctaagcagaagccggtgccac 729
Query: 1009 ccaaaccaatgaaacaatcagaggctcaaccaagcggcaagcaaaccacttttgtgaatt 1068
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 730 ccaaaccaatgaaacaatcagnnnctcaaccaagcggcaagcaaacgacttttgtgaatt 789
Query: 1069 ccctac 1074
||||||
Sbjct: 790 ccctac 795
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,045
Number of extensions: 3871
Number of successful extensions: 3871
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3871
Number of HSP's successfully gapped: 2
Length of query: 1648
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1631
Effective length of database: 8,119,229
Effective search space: 13242462499
Effective search space used: 13242462499
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)