BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20126 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2411_C1 1346 0.0
>BF14_2411_C1
Length = 729
Score = 1346 bits (679), Expect = 0.0
Identities = 706/715 (98%)
Strand = Plus / Plus
Query: 478 atagtatttataactaaaaaataatggatgatgatgactattggaatacaagcgaaacta 537
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 15 atagtatttataactaaaaaataatggatgatgatgattattggaatacaagcgaaacta 74
Query: 538 aagccaaagcttttagtttcgacgatgatgtgctatcaactcgcgagattctggccatag 597
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagccaaagcttttagttttgacgatgatgtgctatcaactcgcgagattctggccatag 134
Query: 598 gtcagaaatcacaccctggccaatcagttgacagtgtgtttactactttaaatgacgccc 657
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gtcagaaatcacaccctggtcaatcagttgacagtgtgtttactactttaaatgacgccc 194
Query: 658 gaactgaactgctgccaatatccagtctagtgtcacccaaagttttagacttgatgatac 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaactgaactgctgccaatatccagtctagtgtcacccaaagttttagacttgatgatac 254
Query: 718 tagcacagtcgggcagagatccgaacaacatcaaagattccgaacaaactttagcaataa 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tagcacagtcgggcagagatccgaacaacatcaaagattccgaacaaactttagcaataa 314
Query: 778 cactgaagaggatcatattgggtcgctcattctctctgcatcaatacaagagcttgagaa 837
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 315 cactgaagaggattatattgggtcgctcattctctctgcatcaatacaagagcttgaaaa 374
Query: 838 ataaaacagaattattagatggcactataagtattggggatggaaatgcaattttaactg 897
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 375 ataaaacagaattattagatggcgctataagtattggggacggaaatgcaattttaactg 434
Query: 898 tcgtgttatatttgatacaaacattgaataagaaattggtgtatgaactattgagcgctc 957
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcgtgttatatttaatacaaacattgaataagaaattggtgtatgaactattgagcgctc 494
Query: 958 gacctttggcattaaatcattatattagttttttacaaactgaggggaaaataacagaat 1017
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 495 gacctttggcattaaatcattatattagttttttacaaactgaagggaaaataacagaat 554
Query: 1018 taactgatttattaacaatgctaggcagaagttctgaggcagctgtctttcaattccagc 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 taactgatttattaacaatgctaggcagaagttctgaggcagctgtctttcaattccagc 614
Query: 1078 acatagtaaaaactcaagggaacagtattgacggtttgttacggaaagtgaataatttgc 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acatagtaaaaactcaagggaacagtattgacggtttgttacggaaagtgaataatttgc 674
Query: 1138 tatcaaatcacttcaaccaacccggtatggacgctcatcagaacaaaatggtggc 1192
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tatcaaatcacttcaaccaacccggtatggacgctcatcagaacaaaatggtggc 729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,927
Number of extensions: 6225
Number of successful extensions: 6225
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6225
Number of HSP's successfully gapped: 1
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)