BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20169 (UTR included)
(2206 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B2B12 1501 0.0
>BF01045B2B12
Length = 793
Score = 1501 bits (757), Expect = 0.0
Identities = 783/793 (98%)
Strand = Plus / Plus
Query: 489 taaaccgccaaaatgttttggggattaataatggagccaaacaaacggtacacccaagtg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaccgccaaaatgttttggggattaataatggagccaaacaaacggtacacccaagtg 60
Query: 549 gtgggtaaaccgttccatatatcacaagcagccatggatatatccactggtgacaatgat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgggtaaaccgttccatatatcacaagcagccatggatatatccactggtgacaatgat 120
Query: 609 ccctgccaagtcatggttgtggttgacggcaagaactttctggtttgcacccttcagaag 668
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 ccctgccaagtcatggttgtggttgacggcaagaacttcctggtttgcacccttcagaag 180
Query: 669 aacagatgcatacaagtcccacttgatctctatttcaaagctggagactcactttccttc 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacagatgcatacaagtcccacttgatctctatttcaaagctggagactcactttccttc 240
Query: 729 ttgacaaatggtaaatgcaatgtccatctaactggatacttggatcccgagtttgaagat 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgacaaatggtaaatgcaatgtccatctaactggatacttggatcccgagtttgaagat 300
Query: 789 gaagaatctgatgaagatgccgaggaagaggaagaagaagaggaagaggaggctcctcaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaatctgatgaagatgccgaggaagaggaagaagaagaggaagaggaggctcctcaa 360
Query: 849 gctaataataaacggaaacttgagaacggcaccgagggtgctgctaacaagaaggctaag 908
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 gctaataataaacggaaacttgagaacggcaccgagggtgctactaacaagaaggctaag 420
Query: 909 ccagacaaaaaaaatgccaagaaattggaggctgtcagctctgagtccgacgatgaagaa 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagacaaaaaaaatgccaagaaattggaggctgtcagctctgagtccgacgatgaagaa 480
Query: 969 gatgaattgcaaaagtttttggaaggagaggacatagatacagatgaaaatgatgaatcc 1028
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgaattgcaaaagtttctggaaggagaggacatagatacagatgaaaatgatgaatcc 540
Query: 1029 ttcaaagttaacacctcaggtgaagcaagtgaggaagatgacgacgatgatgatgatgac 1088
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcaaagtaaacacctcaggtgaagcaagtgaggaagatgacgacgatgatgatgatgac 600
Query: 1089 gatgaagatgaagaagacgatgatgatgatgatgagaaggatgagtcatctgaaaaagct 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgaagatgaagaagacgatgatgatgatgatgagaaggatgagtcatctgaaaaagct 660
Query: 1149 gacacaacactcgacacaagtgtggatagcaaaatagatcaatcaaagcttagcaagtca 1208
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 gacacaacactcgacacaagtgtggatagcaaaatagatctatcaaagcttagcaagtca 720
Query: 1209 gctaagaggcgtctcaagaagaaaataacagttcaaaaagaaccacaagttgctaatggt 1268
|||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 721 gctangnnncgtctcaagaagaaaataaccgttcaaaaagaaccacaagttgctaatggt 780
Query: 1269 gttgataaagcca 1281
|||||||||||||
Sbjct: 781 gttgataaagcca 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,170
Number of extensions: 6703
Number of successful extensions: 6703
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6691
Number of HSP's successfully gapped: 1
Length of query: 2206
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2189
Effective length of database: 8,119,229
Effective search space: 17772992281
Effective search space used: 17772992281
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)