BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20187 (UTR included)
(2761 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2G08 1027 0.0
>BF01047B2G08
Length = 595
Score = 1027 bits (518), Expect = 0.0
Identities = 527/530 (99%)
Strand = Plus / Plus
Query: 241 tgtcggcaaatagtattcggaggttattaaaagtttaaacaatcacgttattatgaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgtcggcaaatagtattcggaggttattaaaagtttaaacaatcacgttattatgaatta 69
Query: 301 tatccaataaccgattgaatggtgttgtgatagtgtgtttcaaaacatccgctgctatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tatccaataaccgattgaatggtgttgtgatagtgtgtttcaaaacatccgctgctatct 129
Query: 361 gactgtcaaaaacgaactgtcgcgtctcattattgaaaggtccagtattagtttggtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gactgtcaaaaacgaactgtcgcgtctcattattgaaaggtccagtattagtttggtaaa 189
Query: 421 agtgtgtgccgtgaacgcttgatgcttttatttggacttgattagacggttactattctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agtgtgtgccgtgaacgcttgatgcttttatttggacttgattagacggttactattctt 249
Query: 481 ttatcacattgaaatcacaaatgattaagttggaatctcctgaggtccacatgtctttgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttatcacattgaaatcacaaatgattaagttggaatctcctgaggtccacatgtctttgc 309
Query: 541 cgcgcgcccctgaccccgccgccctggccgcttactgggcggagtacgaggacctgtgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cgcgcgcccctgaccccgccgccctggccgcttactgggcggagtacgaggacctgtgtc 369
Query: 601 ggcagatcaccacgactgccagcaacgacgacgacgacaaccactatgaagagggcgaat 660
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 370 gtcagatcaccacgactgccagcaacgacgatgacgacaaccactatgaagagggcgaat 429
Query: 661 tagagactgaatggctccaatcagctgggctggcgtccctggcggcgcccttccaggccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tagagactgaatggctccaatcagctgggctggcgtccctggcggcgcccttccaggccg 489
Query: 721 ggctggaggtgtccgaggctcagctcggagaggccgtccgacccctgccg 770
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gactggaggtgtccgaggctcagctcggagaggccgtccgacccctgccg 539
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,556
Number of extensions: 3687
Number of successful extensions: 3687
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3687
Number of HSP's successfully gapped: 1
Length of query: 2761
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2744
Effective length of database: 8,119,229
Effective search space: 22279164376
Effective search space used: 22279164376
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)