BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20188 (UTR included)
(7423 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3119_C1 3077 0.0
>BF14_3119_C1
Length = 1807
Score = 3077 bits (1552), Expect = 0.0
Identities = 1561/1564 (99%)
Strand = Plus / Plus
Query: 4997 gtcgggtaaagaacaagcgaagttagcttgttatctagctcaaaagcacggcctggacgc 5056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtcgggtaaagaacaagcgaagttagcttgttatctagctcaaaagcacggcctggacgc 303
Query: 5057 tctggaggtttggctgcagtacgctggaaatgctgtaggtgacctggacacggaaatatt 5116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tctggaggtttggctgcagtacgctggaaatgctgtaggtgacctggacacggaaatatt 363
Query: 5117 accgccggtgggagacgacgctgctcagaggatatctgaatacctgtggcccctgatccc 5176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 accgccggtgggagacgacgctgctcagaggatatctgaatacctgtggcccctgatccc 423
Query: 5177 ggggacagaccactcggccctcatacacttcttcaatgtgttgaagaaggtggacgagaa 5236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggggacagaccactcggccctcatacacttcttcaatgtgttgaagaaggtggacgagaa 483
Query: 5237 gctggtgctgcacggcctgtcgtccgcggaacacgtcaagctgctgaagaaaactagagc 5296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gctggtgctgcacggcctgtcgtccgcggaacacgtcaagctgctgaagaaaactagagc 543
Query: 5297 cgcctccaaagagctggactacaagttgctggtgagtgctccggccggcgaccagttgtg 5356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cgcctccaaagagctggactacaagttgctggtgagtgctccggccggcgaccagttgtg 603
Query: 5357 ttcgcacgtggtgtcggtgtcccgacccgacacagtgggtctggtgtcgaagctgctccg 5416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttcgcacgtggtgtcggtgtcccgacccgacacagtgggtctggtgtcgaagctgctccg 663
Query: 5417 ctcgctgcccgctccgctccgctccccgctgccgcctcacaccctgtacaccgcctggct 5476
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ctcgctgcccgccccgctccgctccccgctgccgcctcacaccctgtacaccgcctggct 723
Query: 5477 caccaagtacttcttcagcgtgggcgagtcgaccgtgagcagtaagaaatggatgcagca 5536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 caccaagtacttcttcagcgtgggcgagtcgaccgtgagcagtaagaaatggatgcagca 783
Query: 5537 gtggcggcagtgcgcgagctacttcaacaagctgtccagcgacgagctgctgaagttcgt 5596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gtggcggcagtgcgcgagctacttcaacaagctgtccagcgacgagctgctgaagttcgt 843
Query: 5597 ctccaacacctgcttcacggaggaagccatacggagggtcccggccgcgactcgcagcct 5656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ctccaacacctgcttcacggaggaagccatacggagggtcccggccgcgactcgcagcct 903
Query: 5657 catgatcatgcaagccgtcgactactgccagcaggaacaagagaacgaaatgaaatttac 5716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 catgatcatgcaagccgtcgactactgccagcaggaacaagagaacgaaatgaaatttac 963
Query: 5717 caagaacgagcagggttggtctgagacgggccaggagctgagccgctgggggcgcttcct 5776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 caagaacgagcagggttggtctgagacgggccaggagctgagccgctgggggcgcttcct 1023
Query: 5777 cgataactaccactcggacagcgtgtcttctctgaggaccatcagcgaacagaacgacgt 5836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 cgataactaccactcggacagcgtgtcttctctgaggaccatcagcgaacagaacgacgt 1083
Query: 5837 gtggccggccctggagctgagccgcggcgaggcggggccggcgctggaggcgctgtcgac 5896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gtggccggccctggagctgagccgcggcgaggcggggccggcgctggaggcgctgtcgac 1143
Query: 5897 cctgtgcacgggcggtctgcgagcgtccgccctcacctccctgctgcggtgtctcggcct 5956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 cctgtgcacgggcggtctgcgagcgtccgccctcacctccctgctgcggtgtctcggcct 1203
Query: 5957 gccctacgacgagcccgccgtgcttcaacacgcgctcaccaggatacggcacaaggaaga 6016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 gccctacgacgagcccgccgtgcttcaacacgcgctcaccaggatacggcacaaggaaga 1263
Query: 6017 catccagagcgtggtggcgcgcgtcatccagtaccacaaggacggcatcaagttcagcga 6076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 catccagagcgtggtggcgcgcgtcatccagtaccacaaggacggcatcaagttcagcga 1323
Query: 6077 ggacttcatagaggaggtgctgcaggtggccggccagctgagtctggagccgcacaagct 6136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 ggacttcatagaggaggtgctgcaggtggccggccagctgagtctggagccgcacaagct 1383
Query: 6137 gctgggcgtgttggcgatcagccgccgcgcccgcctccgggacgaacacgacttggcgaa 6196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 gctgggcgtgttggcgatcagccgccgcgcccgcctccgggacgaacacgacttggcgaa 1443
Query: 6197 catagcgcgctcctccgccgacctcttcaagaccgagtggccggactccgagtacgccaa 6256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 catagcgcgctcctccgccgacctcttcaagaccgagtggccggactccgagtacgccaa 1503
Query: 6257 gggactgaccgaggtaaagctgatgaccgcggagggtcgcgaggaggcgtacctggcgct 6316
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 gggactgaccgaggaaaagctgatgaccgcggagggtcgcgaggaggcgtacctggcgct 1563
Query: 6317 ggcggcggacggcgacacctggccgaggaagaaggctctcgttgatgctctggcctgctg 6376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ggcggcggacggcgacacctggccgaggaagaaggctctcgttgatgctctggcctgctg 1623
Query: 6377 gccgcggacacctcttgctggcggtatgagcgcccagggctccctggcacagaaactctg 6436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 gccgcggacacctcttgctggcggtatgagcgcccagggctccctggcacagaaactctg 1683
Query: 6437 cctggagccgccgcgggaggcgcgtatgctgctgcaactgctgctgaggaggccgatgat 6496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tctggagccgccgcgggaggcgcgtatgctgctgcaactgctgctgaggaggccgatgat 1743
Query: 6497 tacggacgaggagctaaagatcatagccaccgaggcctgtgaagacgcagcgctaaacac 6556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 tacggacgaggagctaaagatcatagccaccgaggcctgtgaagacgcagcgctaaacac 1803
Query: 6557 ggtc 6560
||||
Sbjct: 1804 ggtc 1807
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 99,291
Number of extensions: 11866
Number of successful extensions: 11866
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11862
Number of HSP's successfully gapped: 1
Length of query: 7423
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7405
Effective length of database: 8,109,745
Effective search space: 60052661725
Effective search space used: 60052661725
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)