BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20191 (UTR included)
(2110 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2A01 1378 0.0
BF01052A2D07 119 2e-26
BF01021A2F10 84 1e-15
BF14_1341_C1 80 2e-14
BF01038A2H08 78 6e-14
BF01025A1H05 78 6e-14
>BF01022A2A01
Length = 770
Score = 1378 bits (695), Expect = 0.0
Identities = 751/770 (97%), Gaps = 6/770 (0%)
Strand = Plus / Plus
Query: 453 taaaacgttaaaagtaaaaaagtaaagtgtaaacaactctcactcaaaatgtttactaga 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaacgttaaaagtaaaaaagtaaagtgtaaacaactctcactcaaaatgtttactaga 60
Query: 513 aatttaagagtcttttttcgtcgttattcacaaacttgtaccttcaggacttcagaatta 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttaagagtcttttttcgtcgttattcacaaacttgtaccttcaggacttcagaatta 120
Query: 573 tcacctgcacagcacagtgaaaatcaaataggtttattttatacaattgacaaaaattta 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcacctgcacagcacagtgaaaatcaaataggtttattttatacaattgacaaaaattta 180
Query: 633 tgcaagcaactgttcggacatggtggattaccaaaaagttacatgaagcagacaaaaacg 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcaagcaactgttcggacatggtggattaccaaaaagttacatgaagcagacaaaaacg 240
Query: 693 ttcaccgaaacaactctgatggtacgactgcctgctcttgatgtaattaactgcatcaag 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcaccgaaacaactctgatggtacgactgcctgctcttgatgtaattaactgcatcaag 300
Query: 753 aacacggatttcgataaaccagccgtcagatatgtgttatatggggaaaaaggcgctggc 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacacggatttcgataaaccagccgtcagatatgtgttatatggggaaaaaggcgctggc 360
Query: 813 aagtcactcactatggcccatctgttacattacgcccatgaacaagaatttcttatcgtt 872
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 361 aagtcactcactatggcccatctgttacattatgcccatgaacaagaatttcttatcatt 420
Query: 873 catgttccctgggtatcagagtggttaaggagagtaccgcgtcacaaggagatggctaac 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgttccctgggtatcagagtggttaaggagagtaccgcgtcacaaggagatggctaac 480
Query: 933 tcaccaacaaaggagggtttcgtagaccttccattggatgctgccgcatggcttttacat 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaccaacaaaggagggtttcgtagaccttccattggatgctgccgcatggcttttacat 540
Query: 993 tttaagacacagaaccaaacgttactgaaaaatccagatgtgagttt------gaattac 1046
||||||||||||||||||||||||||||||||||||||| | | | | |||
Sbjct: 541 tttaagacacagaaccaaacgttactgaaaaatccagatcttaaaatatccaaagagtac 600
Query: 1047 acttggagtaaaagagagtcaacatctcaaggggctcctctattagagttagtggagctg 1106
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 601 acttggagcaaaagagagtcaacatctgaaggggctcctctattagagttagtggagctg 660
Query: 1107 ggcatcgccagagtaaaatatgcctgtgacgttatagatgctcttgtacatgagatcaaa 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggcatcgccagagtaaaatatgcctgtgacgttatagatgctcttgtacatgagatcaaa 720
Query: 1167 ttgctgtcaaacaataaatgctgtaagacatttgtagccatagatgggtt 1216
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 ttgctgtcaaacaataaatgctgtaaaacatttgtagccatagatgggtt 770
>BF01052A2D07
Length = 357
Score = 119 bits (60), Expect = 2e-26
Identities = 198/244 (81%)
Strand = Plus / Plus
Query: 1867 tttaataatttatttcgacagagtatctacattgttacacttaaaatcaatttaaacatc 1926
||||| || ||||||| ||||| ||||||| ||| ||| ||||||| |||||||||||||
Sbjct: 55 tttaaaaaattatttccacagaatatctaccttggtacccttaaaaacaatttaaacatc 114
Query: 1927 gtagccgacgatgtggcgtttaccgatacattctccaacatagaaccagaaaagtacctc 1986
|| || | | |||| ||||||| |||| |||||| ||||| |||| |||||||||| |
Sbjct: 115 ctaacccaaaaagtggggtttacccataccttctcccacataaaacccgaaaagtacccc 174
Query: 1987 ggcaccaaccaaagtgttcagagtggcttgcttcacggtctgctgtttccacgcaccaga 2046
|| || ||||||||||||| | || ||| ||||||| ||| ||||||| | | ||| |
Sbjct: 175 cgcccccaccaaagtgttcaaaaggggttggttcacgggctggtgtttcccccccccaaa 234
Query: 2047 tttagcgctgctgagaagctttgcaataccagctttgatttgtgggatctcgcttaactt 2106
||| ||||||||| || |||||||| ||| ||||||| ||| |||| | | ||||||||
Sbjct: 235 attaacgctgctgaaaaactttgcaaaacccgctttgaattgggggaacccccttaactt 294
Query: 2107 aggg 2110
||||
Sbjct: 295 aggg 298
>BF01021A2F10
Length = 792
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 329 aggctcaaaaggactcgtatccagagccgtaaaaaaattgacaaaaaaaa 378
||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 97 aggctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 48
>BF14_1341_C1
Length = 1009
Score = 79.8 bits (40), Expect = 2e-14
Identities = 50/52 (96%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 328 aaggctcaaaaggactcgtatccagagccgtaaaaaa-attgacaaaaaaaa 378
||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 942 aaggctcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaaaa 993
>BF01038A2H08
Length = 781
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 332 ctcaaaaggactcgtatccagagccgtaaaaaaattgacaaaaaaaa 378
|||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 525 ctcaaaaggactcgtatccagagccgtaaaaatatttacaaaaaaaa 479
>BF01025A1H05
Length = 756
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 328 aaggctcaaaaggactcgtatccagagccgtaaaaaaattgacaaaaaaaa 378
||||||||||||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 297 aaggctcaaaaggactcgtatccagagccctaaaaacatttacaaaaaaaa 247
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,951
Number of extensions: 12612
Number of successful extensions: 12612
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 12611
Number of HSP's successfully gapped: 7
Length of query: 2110
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2093
Effective length of database: 8,119,229
Effective search space: 16993546297
Effective search space used: 16993546297
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)