BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20196 (UTR included)
(1987 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B1H03 1534 0.0
>BF01041B1H03
Length = 846
Score = 1534 bits (774), Expect = 0.0
Identities = 822/838 (98%)
Strand = Plus / Plus
Query: 987 ttgggtgtggggtgtgtcggcggcggggtggttcagtgtcgcgtgtccctggaccggggc 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttgggtgtggggtgtgtcggcggcggggtggttcagtgtcgcgtgtccctggaccggggc 68
Query: 1047 gcgtacgtgcccggggaaagcgtcgcattatccgccgtcgtcgacaatagatcgcggaca 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcgtacgtgcccggggaaagcgtcgcattatccgccgtcgtcgacaatagatcgcggaca 128
Query: 1107 ctcatcaaggctaccagagcggcgttgacagagacgatccagtacgtggctcacggcaag 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctcatcaaggctaccagagcggcgttgacagagacgatccagtacgtggctcacggcaag 188
Query: 1167 gtggcggcgcgggaggtgcgggagttggcgcgcgtggcgcacggccgggtgcggggcggg 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gtggcggcgcgggaggtgcgggagttggcgcgcgtggcgcacggccgggtgcggggcggg 248
Query: 1227 caggcccagcgctggcgggacgtgctgtacgtgccgccgctgccacccaccaacctcaga 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caggcccagcgctggcgggacgtgctgtacgtgccgccgctgccacccaccaacctcaga 308
Query: 1287 ggctgtcatctcatatccgtgcagtacgacgtctttttcatccttgaaccgaagagtctc 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggctgtcatctcatatccgtgcagtacgacgtctttttcatccttgaaccgaagagtctc 368
Query: 1347 gaaaaggaagtgaaactccaacttccggtactgctaggcacatacccattcagagacgac 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaaaaggaagtgaaactccaacttccggtactgctaggcacatacccattcagagacgac 428
Query: 1407 gacgcggaacgcccgcccacgcactaccccaccacgctgcccatcttcaggccctggctg 1466
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 429 gacgcggaacgcccgcccacgcactaccccaccacgctgcccatcttcagaccctggctg 488
Query: 1467 gctgacaaacagtcgcagtgacatgcgatcacacctctagtgtgaaacctctgtggctcg 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctgacaaacagtcgcagtgacatgcgatcacacctctagtgtgaaacctctgtggctcg 548
Query: 1527 tcaatcaaagaggttaaagagtctatactgtatgcaactcactgacagaaaaagcacgtc 1586
|||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||
Sbjct: 549 tcaatcaaggaggttctagagtctatactacatgcaactcagtgacagaaaaagcacgtt 608
Query: 1587 ctaacctccttggttcggcgaccataaaggttgtatatcttactggcataataaagattg 1646
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct: 609 ctaacctccttggttcggcgaccataaaggttgtatgtcttactgtcataataaagatcg 668
Query: 1647 aagtacactttgagatccggttaaatgtttgatgttgaaaataatgtaaagttctgtata 1706
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aagtacactttgagatccggtgaaatgtttgatgttgaaaataatgtaaagttctgtata 728
Query: 1707 tttggaatatttttcaaacatttgatattttatatgcatttacacttagatgtaataact 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 729 tttggaatatttttcaaacatttgatattttatatgcatttacacttagatgttataact 788
Query: 1767 tttgtgattattatcacacgtagccgactcgcgtctccaatatactgcttatgtagcg 1824
||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||
Sbjct: 789 tttgtgattattatcacacgtagtcgactcgcgtttccagtatactgcttatgtagcg 846
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,586
Number of extensions: 4485
Number of successful extensions: 4485
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4485
Number of HSP's successfully gapped: 1
Length of query: 1987
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1970
Effective length of database: 8,119,229
Effective search space: 15994881130
Effective search space used: 15994881130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)