BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20200 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2H06 1181 0.0
>BF01020A2H06
Length = 642
Score = 1181 bits (596), Expect = 0.0
Identities = 623/632 (98%)
Strand = Plus / Plus
Query: 354 acataacaaaatagaaacatcatattttgattgtataaagtacccttttgaaactataac 413
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 11 acataacaaaatagaaacatcatattttgattgtataacatacccttttgaaactataac 70
Query: 414 gttttttcatttatatcttttatgtataaatgtaaattactggaaaatattaagttatcc 473
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 71 gttttttcatttatatcttttatgtataaatgtaacttactggaaaatattaagttatca 130
Query: 474 ttaaagacttagcttatagaaaggattatggctttagttgcttacgaaaatagtgactct 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ttaaagacttagcttatagaaaggattatggctttagttgcttacgaaaatagtgactct 190
Query: 534 agtgaatttgaggacgacgcggaagaaaataacataccggtgaaacagctcaaaagagaa 593
|||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 191 agtgaatttgaggatgacgcggaagaaaatatcataccattgaaacagctcaaaagagaa 250
Query: 594 gatgattctgccactaagcccgattcagctgtacctgaaagtagtacaaacctgtttaat 653
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatgattcagccactaagcccgattcagctgtacctgaaagtagtacaaacctgtttaat 310
Query: 654 caacttccaaaaccagttaaagacactaacagtgtaatagaggaagatgatgaattttta 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caacttccaaaaccagttaaagacactaacagtgtaatagaggaagatgatgaattttta 370
Query: 714 cataaaaaggatccccagcccgacatagtgaaacctaaaacaaggataacaatacctcta 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cataaaaaggatccccagcccgacatagtgaaacctaaaacaaggataacaatacctcta 430
Query: 774 ttgagtgatttcaaagatgttcaaaatactgtaccaacttccaaaacaaaatgtatgggt 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgagtgatttcaaagatgttcaaaatactgtaccaacttccaaaacaaaatgtatgggt 490
Query: 834 gagaaaaagtctggactactcggtatactgccacaaccgaaaaacaaatttacgagcaca 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gagaaaaagtctggactactcggtatactgccacaaccgaaaaacaaatttacgagcaca 550
Query: 894 acaaaatcactaattcctaacgttgtttcacaaaacacaaaaacaaataatattaacaag 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acaaaatcactaattcctaacgttgtttcacaaaacacaaaaacaaataatattaacaag 610
Query: 954 aaacaacttccatcaccagtaaagttaaagac 985
||||||||||||||||||||||||||||||||
Sbjct: 611 aaacaacttccatcaccagtaaagttaaagac 642
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,338
Number of extensions: 5725
Number of successful extensions: 5725
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5723
Number of HSP's successfully gapped: 1
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)