BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20201 (UTR included)
(2320 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1H07 1084 0.0
>BF01022A1H07
Length = 564
Score = 1084 bits (547), Expect = 0.0
Identities = 560/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 509 ccttagtgatatatatcagaaaagtttacatgaaaacgaaaaaaatattaaattctggga 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttagtgatatatatcagaaaagtttacatgaaaacgaaaaaaatattaaattctggga 60
Query: 569 agaatatttacaaaatctaaacactctcaactttgaaatctattctgataagttgtcagt 628
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatatttacaaa-tctaaacactctcaactttgaaatctattctgataagttgtcagt 119
Query: 629 accaatattagtacctattggaaataaaatattatttaggggagcattaaaacacacaaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 accaatattagtacctattggaaataaaatattatttaggggagcattaaaacacacaaa 179
Query: 689 tgaagtgaccgtagccttaggcgcggattattttgctaaatgttctattaaacaggctga 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgaagtgaccgtagccttaggcgcggattattttgctaaatgttctattaaacaggctga 239
Query: 749 ggtactgaggcagcacagaattaaagatgcaaaatcaaaacttgaagaatataataaaga 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggtactgaggcagcacagaattaaagatgcaaaatcaaaacttgaagaatataataaaga 299
Query: 809 gaaagaatatcttgaaaatcaactatcttttggaaaacaaaatgtatttggtaatactga 868
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 300 gaaagaatatcttgaaaatcaactatcttttggaaaacaaaatgtatatggtaatactga 359
Query: 869 tcaggacattattgaagtttgtactgaagaggaagataaaacgtggagggagcagcacag 928
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 360 tcaggacattattgaagtttgtactgaagaggaagataaagcgtggagggagcagcacag 419
Query: 929 agagagactgaaacgatatcatcagagtgacgataagaagaaagaaaacataagtaaaga 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agagagactgaaacgatatcatcagagtgacgataagaagaaagaaaacataagtaaaga 479
Query: 989 catctccgacgaagaactgtggatgaggttggaggagttggagttacaggaggaaatgca 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 catctccgacgaagaactgtggatgaggttggaggagttggagttacaggaggaaatgca 539
Query: 1049 aaatgaaatgcaaaactcagata 1071
|||||||||||||||||||||||
Sbjct: 540 aaatgaaatgcaaaactcagata 562
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,858
Number of extensions: 8592
Number of successful extensions: 8592
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8591
Number of HSP's successfully gapped: 1
Length of query: 2320
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2303
Effective length of database: 8,119,229
Effective search space: 18698584387
Effective search space used: 18698584387
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)