BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20204 (UTR included)
(2590 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2280_C1 1168 0.0
BF14_385_C2 823 0.0
BF14_385_C1 761 0.0
BF01050B2H06 678 0.0
>BF14_2280_C1
Length = 961
Score = 1168 bits (589), Expect = 0.0
Identities = 602/605 (99%), Gaps = 1/605 (0%)
Strand = Plus / Plus
Query: 1987 tgcaacagccgcccatggtaatgggcatgaacgcgcccatgatgcccatggggtcgatgc 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tgcaacagccgcccatggtaatgggcatgaacgcgcccatgatgcccatggggtcgatgc 68
Query: 2047 cgatgcgcccctccataccgcccaccacaaaccaattcagttaaatggctatccagtaat 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cgatgcgcccctccataccgcccaccacaaaccaattcagttaaatggctatccagtaat 128
Query: 2107 agtaccctaagaacgagatttgaatcacataacaataggaaacagattcgagatcggatt 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agtaccctaagaacgagatttgaatcacataacaataggaaacagattcgagatcggatt 188
Query: 2167 ttgagctctaattatataatcatcgagtttaaattcgcttatggaattgtttgtccgatc 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttgagctctaattatataatcatcgagtttaaattcgcttatggaattgtttgtccgatc 248
Query: 2227 tctgttattacttaagctgcaggttatatataataaagtcgtctgcggcgtttgtatata 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tctgttattacttaagctgcaggttatatataataaagtcgtctgcggcgtttgtatata 308
Query: 2287 ctgtagctgtatgctcaatggttctgccaaggtggctgaatcgggtatgtaatttgtttt 2346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctgtagctgtatgctcaatggttctgccaaggtggctgaatcgggtatgtaatttgtttt 368
Query: 2347 ttttttattattatgaaaatctacccctttagtaaattattatgtagatcgacgaatata 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttttttattattatgaaaatctacccctttagtaaattattatgtagatcgacgaatata 428
Query: 2407 atttttttacgaataaaatgtatgag-aaaaaatatataaattcgagttaccccacattc 2465
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 429 atttttttacgaataaaatgtatgagaaaaaaatatataaattcgagttaccccacattc 488
Query: 2466 actacgcctatagttagtacgaaagcataaatcgtagttaaattctttattatttttctt 2525
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 actacgtctatagttagtatgaaagcataaatcgtagttaaattctttattatttttctt 548
Query: 2526 atgaaatggtgcatagaattattttattaaccaaaagaaagatagacatcacattccata 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atgaaatggtgcatagaattattttattaaccaaaagaaagatagacatcacattccata 608
Query: 2586 cgtgt 2590
|||||
Sbjct: 609 cgtgt 613
>BF14_385_C2
Length = 806
Score = 823 bits (415), Expect = 0.0
Identities = 424/427 (99%)
Strand = Plus / Plus
Query: 570 agattcacgcagtatttagcgtcgagcaattcgacgtttcaattaagcaacttccatgac 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agattcacgcagtatttagcgtcgagcaattcgacgtttcaattaagcaacttccatgac 439
Query: 630 aaaagcggggttcaaggagcggccggtgccaggatcggatatgacatgtcgccgttcatc 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaagcggggttcaaggagcggccggtgccaggatcggatatgacatgtcgccgttcatc 499
Query: 690 aggaggtacgccaagtacctcaacgagaaggccctgtcctataggactgtcgcctttgac 749
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 aggaggtacgccaagtacctcaacgagaaggccctgtcctataggactgtcgccttcgac 559
Query: 750 ttctgcaaggtcaagaggggtaaagaagagggctccctccgtatgatgaacgcggagaag 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttctgcaaggtcaagaggggtaaagaagagggctccctccgtatgatgaacgcggagaag 619
Query: 810 ctgttaaagactctgccggtgctacaagcacagctcgacgcgctgctggagttcgattgt 869
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 ctgctaaagactctgccggtgctacaagcacagctggacgcgctgctggagttcgattgt 679
Query: 870 acagccaatgacctcaccaacggggtcatcaatatgtgcttcatgctgttattcagagac 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acagccaatgacctcaccaacggggtcatcaatatgtgcttcatgctgttattcagagac 739
Query: 930 cttatcaggctgttcgcttgctataacgatggcatcatcaacttattggagaagtacttt 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttatcaggctgttcgcttgctataacgatggcatcatcaacttattggagaagtacttt 799
Query: 990 gatatga 996
|||||||
Sbjct: 800 gatatga 806
>BF14_385_C1
Length = 807
Score = 761 bits (384), Expect = 0.0
Identities = 393/396 (99%)
Strand = Plus / Plus
Query: 666 ggatatgacatgtcgccgttcatcaggaggtacgccaagtacctcaacgagaaggccctg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggatatgacatgtcgccgttcatcaggaggtacgccaagtacctcaacgagaaggccctg 471
Query: 726 tcctataggactgtcgcctttgacttctgcaaggtcaagaggggtaaagaagagggctcc 785
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 472 tcctataggactgtcgcctttgacttctgcaaggtcaagaggggtaaagaagaaggctcc 531
Query: 786 ctccgtatgatgaacgcggagaagctgttaaagactctgccggtgctacaagcacagctc 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctccgtatgatgaacgcggagaagctgttaaagactctgccggtgctacaagcacagctg 591
Query: 846 gacgcgctgctggagttcgattgtacagccaatgacctcaccaacggggtcatcaatatg 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gacgcgctgctggagttcgattgtacagccaatgacctcaccaacggggtcatcaatatg 651
Query: 906 tgcttcatgctgttattcagagaccttatcaggctgttcgcttgctataacgatggcatc 965
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 652 tgcttcatgctgttattcagagaccttatcagactgttcgcttgctataacgatggcatc 711
Query: 966 atcaacttattggagaagtactttgatatgaacaagaagaactgccgggatgctctcgac 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 atcaacttattggagaagtactttgatatgaacaagaagaactgccgggatgctctcgac 771
Query: 1026 ctctataagaaattcctcatcaggatggatagagtc 1061
||||||||||||||||||||||||||||||||||||
Sbjct: 772 ctctataagaaattcctcatcaggatggatagagtc 807
Score = 145 bits (73), Expect = 4e-34
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 570 agattcacgcagtatttagcgtcgagcaattcgacgtttcaattaagcaacttccatgac 629
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 268 agattcacgcagtatttagcgtccagcaattcgacgtttcaattaagcaacttccatgac 327
Query: 630 aaaagcggggttcaagg 646
|||||||||||||||||
Sbjct: 328 aaaagcggggttcaagg 344
>BF01050B2H06
Length = 350
Score = 678 bits (342), Expect = 0.0
Identities = 348/350 (99%)
Strand = Plus / Minus
Query: 1295 ctcgaccaggctggacgcttccaacgggagcatgttcatagacgactccctcaaacagca 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctcgaccaggctggacgcttccaacgggagcatgttcatagacgactccctcaaacagca 291
Query: 1355 ggccctggccgaggaagaagccgccatgaaccaatacaagaacaaggtgcagtctccgac 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 290 ggccctggccgaggaagaagccgccatgaaccaatacaagaacaaggtgcagtctcctac 231
Query: 1415 aaactcagccaataatccattcttgtctacgggtccgactgtagtggacttattcgctcc 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aaactcagccaataatccattcttgtctacgggtccgactgtagtggacttattcgctcc 171
Query: 1475 tgcaccggagccccagcagcctcctgcggggggcaaagcctccgacgatctcctttcact 1534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cgcaccggagccccagcagcctcctgcggggggcaaagcctccgacgatctcctttcact 111
Query: 1535 gggcaatcccttcgcagacatgtttggagccccgcaacccgcgcccgccgcctggcagag 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gggcaatcccttcgcagacatgtttggagccccgcaacccgcgcccgccgcctggcagag 51
Query: 1595 caacgggttcgcggccttcccgcaaccgacgcaaccatcgcaaccagccc 1644
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 caacgggttcgcggccttcccgcaaccgacgcaaccatcgcaaccagccc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,591
Number of extensions: 6024
Number of successful extensions: 6024
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6023
Number of HSP's successfully gapped: 5
Length of query: 2590
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2573
Effective length of database: 8,119,229
Effective search space: 20890776217
Effective search space used: 20890776217
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)