BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20225 (UTR included)
(2830 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1F12 1530 0.0
>BF01053B1F12
Length = 792
Score = 1530 bits (772), Expect = 0.0
Identities = 787/792 (99%)
Strand = Plus / Plus
Query: 1110 gcctccttgagtctctctgacaaaacaacactgtttagaagagccacggcgtccattaag 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctccttgagtctctctgacaaaacaacactgtttagaagagccacggcgtccattaag 60
Query: 1170 ggaggatcaagatatcagacatacagcgcctatttaaaaccagcactcaaaagaccaaat 1229
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 ggaggatcaagatatcagacatacagcgcctatttgaaaccagcactcaaaagaccaaat 120
Query: 1230 ctacatgtcctacttaaaacacaggcaatatcaatacgttttgaggatcagaaagtttcg 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacatgtcctacttaaaacacaggcaatatcaatacgttttgaggatcagaaagtttcg 180
Query: 1290 tctctttacattttggaagaccatcgaaatctggacaatatatttgtaaacaaagaaata 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctctttacattttggaagaccatcgaaatctggacaatatatttgtaaacaaagaaata 240
Query: 1350 atacttagcgccggttccattaaaacaccacaaatcttaatgctgtctggtataggacca 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atacttagcgccggttccattaaaacaccacaaatcttaatgctgtctggtataggacca 300
Query: 1410 aggaatttaatgagaaggctaaggctagaattggtatcagacaatgagttcgtgggtcgc 1469
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 301 aggaatgtaatgagaaggctaaggctagaattgatatcagacaatgagttcgtgggtcgc 360
Query: 1470 aacctgcacgatcatcttaatgtgcctatctatgtcagcataaaaaaacctatcagtatt 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacctgcacgatcatcttaatgtgcctatctatgtcagcataaaaaaacctatcagtatt 420
Query: 1530 actttagccaaggtatttagtgccagtaccctttggaattacttttggaacggagacggt 1589
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 actttagccaaggtatttagtgccagtaccctttggaattacttttggaatggagacggt 480
Query: 1590 tatttagcttttcctcctgtagctggtgtggaatatcgtaactcttcagctctgatgctg 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatttagcttttcctcctgtagctggtgtggaatatcgtaactcttcagctctgatgctg 540
Query: 1650 ttctcaatgggatcttccagtgagagattgttacgagacttgtccaactataaacctcag 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttctcaatgggatcttccagtgagagattgttacgagacttgtccaactataaacctcag 600
Query: 1710 gttttccgtgaaacatttccgttccacaacgacaccagtaaagaaggcttcatgtggctg 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttttccgtgaaacatttccgttccacaacgacaccagtaaagaaggcttcatgtggctg 660
Query: 1770 gcgtcctgtgtggcacctcggagtcgtggtcaagttacagtcacggacccgagcactagt 1829
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgtcctgtgtgtcacctcggagtcgtggtcaagttacagtcacggacccgagcactagt 720
Query: 1830 gttccgccggaagttgaccccaactaccttcatcgagaatatgatgtacgatgcattatt 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttccgccggaagttgaccccaactaccttcatcgagaatatgatgtacgatgcattatt 780
Query: 1890 agagcgatcaga 1901
||||||||||||
Sbjct: 781 agagcgatcaga 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 321,624
Number of extensions: 6983
Number of successful extensions: 6983
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6983
Number of HSP's successfully gapped: 1
Length of query: 2830
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2813
Effective length of database: 8,119,229
Effective search space: 22839391177
Effective search space used: 22839391177
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)