BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20238 (UTR included)
(2527 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1F04 1421 0.0
>BF01027A1F04
Length = 748
Score = 1421 bits (717), Expect = 0.0
Identities = 742/749 (99%), Gaps = 1/749 (0%)
Strand = Plus / Plus
Query: 1428 ccagatttacaaatatctcttgacaagctcggtctcacagggagtccgtccatcaaggag 1487
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagatttacaa-tatctcttgacaagctcggtctcacagggagtccgtccatcaaggag 59
Query: 1488 tttgataacgactggaaggtcaatgaaacaaaattaacagacagtgatgtgtgtgaaggg 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tttgataacgactggaaggtcaatgaaacaaaattaacagacagtgatgtgtgtgaaggg 119
Query: 1548 gagttattattgaagggtccggctgtgttcactaggtattggaatcgcgcgcccagcgcc 1607
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gagttattattgaagggtcccgctgtgttcactaggtattggaatcgcgcgcccagcgcc 179
Query: 1608 ttatcatcagatttcacttcagacgggtggttccgcactggcgatatggcctccttctcc 1667
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttttcatcagatttcacttcagacgggtggttccgcactggcgatatggcctccttctcc 239
Query: 1668 cagggcaccttcaagatcatgggccggacatcagtagacatcattaagacgggaggatac 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cagggcaccttcaagatcatgggccggacatcagtagacatcattaagacgggaggatac 299
Query: 1728 aaagtcagcgccctacaagtggaatccgcccttcttgagcatccagacatatcagatgta 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aaagtcagcgccctacaagtggaatccgcccttcttgagcatccagacatatcagatgta 359
Query: 1788 gccgtattgggtatacctgaccaacattacggagagattgtatcagcggtggtcgctctc 1847
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcggtattgggtatacctgaccaacattacggagagattgtatcagcggtggtcgctctc 419
Query: 1848 aaggaaggtaggagtctgaccctgagagagttgaaagatgaagctggcaagagactagcg 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaggaaggtaggagtctgaccctgagagagttgaaagatgaagctggcaagagactagcg 479
Query: 1908 ccgtaccaactgccaaaaactatggttatagtggatcagatgccgaggaacgctatgggc 1967
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 480 ccgtaccaactgccaaaaactatggttatagtgtatcagatgccgaggaacgctatgggc 539
Query: 1968 aaacttgacaagaagctcatcagacagcagtttggtgagaagttggtgtttaaacagtga 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaacttgacaagaagctcatcagacagcagtttggtgagaagttggtgtttaaacagtga 599
Query: 2028 agaccgtctcagcgggtggatattcagcgccatggtgtgaaaaaccacaagatttatacc 2087
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agaccgtctcagcaggtggatattcagcgccatggtgtgaaaaaccacaagatttatacc 659
Query: 2088 accatataatataaaacatacaaacatacatataatatataaatattaacaaccaagtct 2147
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 660 accatataatataaaacatacaaacatacacataatatataaatattaacaaccaagtct 719
Query: 2148 ctaggtcccatcaatgtgactgaaccgtc 2176
|||||||||||||||||||||||||||||
Sbjct: 720 ctaggtcccatcaatgtgactgaaccgtc 748
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,371
Number of extensions: 12312
Number of successful extensions: 12312
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12311
Number of HSP's successfully gapped: 1
Length of query: 2527
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2510
Effective length of database: 8,119,229
Effective search space: 20379264790
Effective search space used: 20379264790
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)