BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20239 (UTR included)
(2437 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2B07 1207 0.0
BF01027A1F04 446 e-125
>BF01016B2B07
Length = 779
Score = 1207 bits (609), Expect = 0.0
Identities = 639/649 (98%)
Strand = Plus / Plus
Query: 372 gtcacaatgaagctgcctcgtttcgattttgaaaatggttcatcagctcgtaaacccacg 431
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 131 gtcacaatgaagctgcctcgttttgattttgaaaatggttcatcagctcgtaagcccacg 190
Query: 432 agggttgtgatatatcatgagcgttacacggtaggcgagactacggggggattgagcgcg 491
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 191 agggttgtgatatatcatgagcgttacacggtaggcgagactacggggggactgagcgcg 250
Query: 492 cttttcaccatgctgtgtataatcgacctctttggtgtattccctgtcgttgctctaccg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cttttcaccatgctgtgtataatcgacctctttggtgtattccctgtcgttgctctaccg 310
Query: 552 aaaagtattatttcctgtggtatctacggcataccgctggtggtggccgtgttttctctc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaaagtattatttcctgtggtatctacggcataccgctggtggtggccgtgttttctctc 370
Query: 612 cagctgtatacagctgtactgctgggtaggagctggctgctggctcatgagatatcagct 671
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 371 cagctgtacacagctgtactgctgggtaggagctggctgctggctcacgagatatcagct 430
Query: 672 gacatgagagagaagagcaggtttccctacgcagcggtggctgagttggccttcgggaga 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gacatgagagagaagagcaggtttccctacgcagcggtggctgagttggccttcgggaga 490
Query: 732 aaagctcggagtctcgtgaccttccttatagatgccacagtattcggggccggggtcccc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaagctcggagtctcgtgaccttccttatagatgccacagtattcggggccggggtcccc 550
Query: 792 aactttatttttgcgtcgcagagtatgcagctgttttggtggaaaactaccgggggctcc 851
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 551 aactttatttttgcgtcgcagagtatgcagctgttttggtggaaaaccaccgggggctcc 610
Query: 852 gtgaacgtatcctactgcgtttggatgatcgttatagggctcctgttgtgtcccgtcatg 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gtgaacgtatcctactgcgtttggatgatcgttatagggctcctgttgtgtcccgtcatg 670
Query: 912 tggctgggctctccaaaagacatgaaggcaatagcgcttacgtcagtttgcatagtgagc 971
|||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 671 tggctgggctctccaaaagacatgaaggcaatagcgctaacgtcagtgttcatagtgagc 730
Query: 972 acggtggctgtaagtacgtggataggaatatacatggatgacagctctc 1020
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 731 acggtggctgttagtacgtggataggaatatacatggatgacagctctc 779
>BF01027A1F04
Length = 748
Score = 446 bits (225), Expect = e-125
Identities = 231/233 (99%)
Strand = Plus / Minus
Query: 2205 gacggttcagtcacattgatgggacctagagacttggttgttaatatttatatattatat 2264
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 748 gacggttcagtcacattgatgggacctagagacttggttgttaatatttatatattatgt 689
Query: 2265 gtatgtttgtatgttttatattatatggtggtataaatcttgtggtttttcacaccatgg 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtatgtttgtatgttttatattatatggtggtataaatcttgtggtttttcacaccatgg 629
Query: 2325 cgctgaatatccacccgctgagacggtcttcactgtttaaacaccaacttctcaccaaac 2384
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cgctgaatatccacctgctgagacggtcttcactgtttaaacaccaacttctcaccaaac 569
Query: 2385 tgctgtctgatgagcttcttgtcaagtttgcccatagcgttcctcggcatctg 2437
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgctgtctgatgagcttcttgtcaagtttgcccatagcgttcctcggcatctg 516
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,522
Number of extensions: 7802
Number of successful extensions: 7802
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7802
Number of HSP's successfully gapped: 2
Length of query: 2437
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2420
Effective length of database: 8,119,229
Effective search space: 19648534180
Effective search space used: 19648534180
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)