BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20240 (UTR included)
(1627 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2370_C1 1086 0.0
>BF14_2370_C1
Length = 1004
Score = 1086 bits (548), Expect = 0.0
Identities = 557/560 (99%)
Strand = Plus / Minus
Query: 387 acatatctattttgttatttgaagttcaaacttaatctagcacgtacaaagagacacaga 446
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 acatatctgttttgttatttgaagttcaaacttaatctagcacgtacaaagagacacaga 944
Query: 447 gcattagttacatccatagaaataattatgctgtgatatttttaaatattaacaatggtg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gcattagttacatccatagaaataattatgctgtgatatttttaaatattaacaatggtg 884
Query: 507 gtaaacgcaccagattctcctatacaggctgaagtgatatttgtaatagaagcgacgtca 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gtaaacgcaccagattctcctatacaggctgaagtgatatttgtaatagaagcgacgtca 824
Query: 567 gtgaacagcgctttcataaatgaactgaaaacaaactacattatacccacactcgaatat 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gtgaacagcgctttcataaatgaactgaaaacaaactacattatacccacactcgaatat 764
Query: 627 tttcatggtggtgctttagaggagggtgtgggcagtggttcagtgtatggggtagtggcc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tttcatggtggtgctttagaggagggtgtgggcagtggttcagtgtatggggtagtggcc 704
Query: 687 taccaagctgcagactgtcaccctggttcccctgtctcaacatttggtccatttacttca 746
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 taccaagctgcggactgtcaccctggttcccctgtctcaacatttggtccatttacttca 644
Query: 747 ccggagacagttatagacacagttgataatatacagttcataggtggtcatgcagaaagc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 643 ccggagacagttatagacacagttgataatatacagttcataggtggtcatgcggaaagc 584
Query: 807 cgagcttgtgtcactgaagccctaaccgtggcgctatcatgcctcgaggagttgggtcgc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cgagcttgtgtcactgaagccctaaccgtggcgctatcatgcctcgaggagttgggtcgc 524
Query: 867 actgatatacctatgcatgtggtgctactgtgctgttcaccgccctactccgcctacaac 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 actgatatacctatgcatgtggtgctactgtgctgttcaccgccctactccgcctacaac 464
Query: 927 ggtggcctggtgccagctgg 946
||||||||||||||||||||
Sbjct: 463 ggtggcctggtgccagctgg 444
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,003
Number of extensions: 4824
Number of successful extensions: 4824
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4824
Number of HSP's successfully gapped: 1
Length of query: 1627
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1610
Effective length of database: 8,119,229
Effective search space: 13071958690
Effective search space used: 13071958690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)