BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20263 (UTR included)
(1047 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 103 6e-22
BF01016B1E06 84 5e-16
BF01043B1E03 82 2e-15
BF01049B1F01 80 8e-15
BF01017A1F03 76 1e-13
BF01044B2F11 72 2e-12
BF01021A2B11 68 3e-11
>BF14_335_C4
Length = 1491
Score = 103 bits (52), Expect = 6e-22
Identities = 115/136 (84%)
Strand = Plus / Minus
Query: 4 cttgcgacccaggtgtatgtggaaggggcgcctatctaaagcgcgttaaacgctcacctc 63
||||||||||||||||| || ||||||| ||||| | |||| |||||||||||||||
Sbjct: 1275 cttgcgacccaggtgtaggtttaaggggcctttatcttacgcgcattaaacgctcacctc 1216
Query: 64 tgctgtccaagctcctctctctatctaaccaaattttaaacgatccaactagtgctgcct 123
|| |||||||||||||||||| |||||||||| | || |||||| |||| |||||||
Sbjct: 1215 aactttccaagctcctctctctacctaaccaaatatgaatcgatcctgctagggctgcct 1156
Query: 124 tcgacgcacgttccaa 139
| ||| ||||||||||
Sbjct: 1155 tagactcacgttccaa 1140
>BF01016B1E06
Length = 606
Score = 83.8 bits (42), Expect = 5e-16
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 7 gcgacccaggtgtatgtggaaggggcgcctatctaaagcgcgttaaacgctcacctctgc 66
|||||||||||||| || ||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 230 gcgacccaggtgtaggtttaaggggc-cctatctaa--cgcgttaaacgctcacctccac 286
Query: 67 tgtccaagctcctctctctatctaaccaaattt 99
|||||| |||||||||||| ||||||||||||
Sbjct: 287 cgtccaatctcctctctctacctaaccaaattt 319
>BF01043B1E03
Length = 830
Score = 81.8 bits (41), Expect = 2e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 4 cttgcgacccaggtgtatgtggaaggggcgcctatctaaagcgcgttaaacgctcacctc 63
||||| |||||||| || || || |||| ||||||||| ||||||||| |||||||||
Sbjct: 419 cttgcaacccaggtataggtttaaagggcccctatctaacgcgcgttaagtgctcacctc 360
Query: 64 tgctgtccaagctcctctctctatctaaccaaattttaaac 104
||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 359 cactgtccaaggtcctctctctacctaaccaaatttgaaac 319
>BF01049B1F01
Length = 840
Score = 79.8 bits (40), Expect = 8e-15
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 4 cttgcgacccaggtgtatgtggaaggggcgcctatctaaagcgcgttaaacgctcacctc 63
||||||||||||||||| ||| ||||||| ||||||||| | |||||||| | ||||||
Sbjct: 622 cttgcgacccaggtgtaggtgtaaggggc-cctatctaactcccgttaaacacccacctc 680
Query: 64 tgctgtccaagctcctctctctatctaa 91
| | ||||||||||||||||||| ||||
Sbjct: 681 taccgtccaagctcctctctctacctaa 708
>BF01017A1F03
Length = 782
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 34 cctatctaaagcgcgttaaacgctcacctctgctgtccaagctcctctctctatctaacc 93
||||||||| |||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct: 260 cctatctaatgcgcgttaaacgctcacctccaccgtggaagctcctctctctatctaacc 201
Query: 94 aa 95
||
Sbjct: 200 aa 199
>BF01044B2F11
Length = 728
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 50 taaacgctcacctctgctgtccaagctcctctctctatctaacc 93
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 629 taaacgctcacctccactgtccaagctcctctctctatctaacc 586
>BF01021A2B11
Length = 729
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 10 acccaggtgtatgtggaaggggcgcctatctaaagcgcgttaaacgctcacctctgctgt 69
||||||||||| || ||||| || || |||||| ||||||||||||||||||| | ||
Sbjct: 446 acccaggtgtaggttgaaggcgccccgatctaacacgcgttaaacgctcacctccaccgt 387
Query: 70 ccaagctcctctct 83
||||||||||||||
Sbjct: 386 ccaagctcctctct 373
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 179,849
Number of extensions: 4723
Number of successful extensions: 4723
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 4720
Number of HSP's successfully gapped: 7
Length of query: 1047
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1030
Effective length of database: 8,119,229
Effective search space: 8362805870
Effective search space used: 8362805870
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)