BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20266 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B2D09 1019 0.0
BF01044B2E03 466 e-131
>BF01013B2D09
Length = 846
Score = 1019 bits (514), Expect = 0.0
Identities = 544/553 (98%), Gaps = 2/553 (0%)
Strand = Plus / Plus
Query: 1711 cggggcaggcgggtcagaccggtcaaaacaacggcatcgacgatgactactagtaagaaa 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggggcaggcgggtcagaccggtcaaaacaacggcatcgacgatgactactagtaagaaa 60
Query: 1771 cattcacaacgacggaacgaaacttaagtcaacggactctactatatacagggtgtgact 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattcacaacgacggaacgaaacttaagtcaacggactctactatatacagggtgtgact 120
Query: 1831 tgctgacacactgatgacgtcactgacacatatatatgtcaatgacgtcatgaattatat 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctgacacactgatgacgtcactgacacatatatatgtcaatgacgtcatgaattatat 180
Query: 1891 gtacatgatgatacaatccataaagttaataaaataagagagaataaaaaatattgagag 1950
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 gtacatgatgatacaatccataaagttaataaaataagagaaaataaaaaatattgagag 240
Query: 1951 agatcatatatatacaaatgtaattatcattgttataattgctttgtgagtcacagtaca 2010
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 agatcatatatatacaaatgtaattattattgttataattgctttgtgagtcacagtaca 300
Query: 2011 tatattaaaggtgtttgttactcgactgctaggcaaaagtagtgttgtgtgttactactc 2070
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||
Sbjct: 301 tatattaaaggtgtttgttactcgactgctagacaaaagtagtcttgtgtgttactgctc 360
Query: 2071 gtttgttcttcccgtcacacgctccgagtataaggatctcgatggatggttgtatcaatg 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttgttcttcccgtcacacgctccgagtataaggatctcgatggatggttgtatcaatg 420
Query: 2131 taaataactgtgagcaatctccgcgccaacagatcgacacacatatgatggctccctgtg 2190
||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 421 taaataactgtgagcaatctccgcgccaacagatctacacac--atgatggctccctgtg 478
Query: 2191 ggtcacaagtcacgcctgtgtacgagatgtatttctcttgttttcttctctccgtcgtca 2250
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 479 ggtcacaagtcacgcctgtgtacgagatatatttctcttgttttcttctctccgtcgtca 538
Query: 2251 tctgccgtaggga 2263
|||||||||||||
Sbjct: 539 tctgccgtaggga 551
>BF01044B2E03
Length = 801
Score = 466 bits (235), Expect = e-131
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 500 atttgagagcatcgactcggcgacgagagccaaggaggcgctacacggctgcgacatata 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atttgagagcatcgactcggcgacgagagccaaggaggcgctacacggctgcgacatata 381
Query: 560 ctctggatgctgcacactcaagattgaatttgccaagccagaaagattgaacgtcttcaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctctggatgctgcacactcaagattgaatttgccaagccagaaagattgaacgtcttcaa 441
Query: 620 aaacgaccaagacagttgggattacacattgtccgaagaagctcaacctgtgcaaagaag 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaacgaccaagacagttgggattacacattgtccgaagaagctcaacctgtgcaaagaag 501
Query: 680 tgcaccgcttctacaatcaccccagtatacaggagggcgaccccagccgtacaat 734
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgcaccgcttctacaatcaccccagtatacaggagggcgaccccagccgtacaat 556
Score = 464 bits (234), Expect = e-130
Identities = 243/247 (98%)
Strand = Plus / Plus
Query: 817 atatggatttcggtagtggtggaccacctccgccggggatgatgaaagatcgacacggtc 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atatggatttcggtagtggtggaccacctccgccggggatgatgaaagatcgacacggtc 614
Query: 877 ctccccctccacatcatccgcgcgatggtcgcggctacggtccagagggttacgggggcg 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctccccctccacatcatccgcgcgatggtcgcggctacggtccagagggttacgggggcg 674
Query: 937 agggcttcgtcccgcctccgcccatgcaccacccgatgccgccgcagaatcagggaggtc 996
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaggcttcgtcccgcctccgcccatgcaccacccgatgccgccgcagaatcagggaggtc 734
Query: 997 ctccacagcagggcgctgtgatgatggtgtacggtctcgatccagtcactatcaacgctg 1056
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctccacagcnnngcgctgtgatgatggtgtacggtctcgatccagtcactatcaacgctg 794
Query: 1057 accgact 1063
|||||||
Sbjct: 795 accgact 801
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,605
Number of extensions: 4688
Number of successful extensions: 4688
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4687
Number of HSP's successfully gapped: 3
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)