BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20267 (UTR included)
(3934 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1416_C1 1560 0.0
BF01016B1F07 1326 0.0
BF01013B2D09 206 2e-52
>BF14_1416_C1
Length = 799
Score = 1560 bits (787), Expect = 0.0
Identities = 796/799 (99%)
Strand = Plus / Plus
Query: 2429 agtcaaagactttatatgtaacatatgcggcaaagcattcggcactcagcataacttaga 2488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtcaaagactttatatgtaacatatgcggcaaagcattcggcactcagcataacttaga 60
Query: 2489 ggtgcacggtgtcgtccactcgggcaacaagccgttcgtgtgcggagtgtgtggcaaggc 2548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtgcacggtgtcgtccactcgggcaacaagccgttcgtgtgcggagtgtgtggcaaggc 120
Query: 2549 gttcgccaggagagctgaagttagagaccatatgaggatacacaccggcgagcgcccgtt 2608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcgccaggagagctgaagttagagaccatatgaggatacacaccggcgagcgcccgtt 180
Query: 2609 cgcgtgtgagatctgcggcgctcgcttcacacagcggtccaacctccactcacaccgacg 2668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcgtgtgagatctgcggcgctcgcttcacacagcggtccaacctccactcacaccgacg 240
Query: 2669 tgcaacacacttagacgacaaacgatacgcctgccaacactgctcgaaacggtttaagag 2728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaacacacttagacgacaaacgatacgcctgccaacactgctcgaaacggtttaagag 300
Query: 2729 acgccgtttgctagactaccacgttaaggcggcgcacacgggcgagagacctctcaagtg 2788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgccgtttgctagactaccacgttaaggcggcgcacacgggcgagagacctctcaagtg 360
Query: 2789 tgaggtttgtagggcgaccttcgtgtatcctgagcattacaagaaacacaccagaataca 2848
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaggtttgtagagcgaccttcgtgtatcctgagcattacaagaaacacaccagaataca 420
Query: 2849 cagcggagagaggccttactcgtgtgaagtttgcggtaaaacgttcaattcccgcgacaa 2908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagcggagagaggccttactcgtgtgaagtttgcggtaaaacgttcaattcccgcgacaa 480
Query: 2909 ccggaacacccaccgcttcgtgcacagcgaccggaagccctacgagtgcgtggtgtgcgg 2968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggaacacccaccgcttcgtgcacagcgaccggaagccctacgagtgcgtggtgtgcgg 540
Query: 2969 cgccggctacatgcggaaacagctgctctaccagcacatgaacaccagcggacatttggc 3028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgccggctacatgcggaaacagctgctctaccagcacatgaacaccagcggacatttggc 600
Query: 3029 ggaatccatagtagtgaatcaaccgagagtgacgagcgtggtggatgtgacaccagccag 3088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggaatccatagtagtgaatcaaccgagagtgacgagcgtggtggatgtgacaccagccag 660
Query: 3089 cgaagattcggctaaggcggacaaattccctgacacgatatacgagacgacggaggaatt 3148
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 cgaagattcggctaaggcggacaaattccctgacacgatatacgagacaacggaggaatt 720
Query: 3149 agagttggatacgagcaaagcagttgttacaacacaaggagaaacaaaattctttttcac 3208
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agaattggatacgagcaaagcagttgttacaacacaaggagaaacaaaattctttttcac 780
Query: 3209 agataacaaaaagcttatc 3227
|||||||||||||||||||
Sbjct: 781 agataacaaaaagcttatc 799
>BF01016B1F07
Length = 726
Score = 1326 bits (669), Expect = 0.0
Identities = 702/713 (98%)
Strand = Plus / Plus
Query: 617 aatccaatgcaaagttgatgagattaacagaatgaatgagtgttgttttatttgcaatac 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aatccaatgcaaagttgatgagattaacagaatgaatgagtgttgttttatttgcaatac 73
Query: 677 gaaaactgggctgtatttggtaaacgctacaaacttatttggagatggaatatcacttaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gaaaactgggctgtatttggtaaacgctacaaacttatttggagatggaatatcacttaa 133
Query: 737 ttctgataaaaaattacatgaagttatcggtagtattgtggacaaacaaataaagaaaga 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttctgataaaaaattacatgaagttatcggtagtattgtggacaaacaaataaagaaaga 193
Query: 797 cggtatacattcacatataatatgtaagaagtgccaaaaagctgtagtcgaatatgactc 856
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 194 cggtatacattcacatataatatgtaagaagtgccaaaaagctgtggtcgaatatgactc 253
Query: 857 cttacaagtcagggtacaagccataaaactagagctgaaggagcagtttaagaagacttt 916
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cttacaagtcagagtacaagcaataaaactagagctgaaggagcagtttaagaagacttt 313
Query: 917 aacgaaatatgccatcaactatgaaacatacaacgacgaggcaaagaaaaccgaaaagaa 976
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 314 aacgaaatatgccatcaactatgaaacatacaacgatgaggctaagaaaaccgaaaagaa 373
Query: 977 agaaataaagaaactagtgttaccagcgtccaaactacagcctctacctcccgacttcct 1036
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agaaatgaagaaattagtgttaccagcgtccaaactacagcctctacctcccgacttcct 433
Query: 1037 tataaagaatgcgaaatggccagtctcaagaacaattacaatgccacagttgaagacatc 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tataaagaatgcgaaatggccagtctcaagaacaattacaatgccacagttgaagacatc 493
Query: 1097 aatgacattaccatcatcatcaacactcaatctaaaagtgactgttggttcgtctgtcct 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatgacattaccatcatcatcaacactcaatctaaaagtgactgttggttcgtctgtcct 553
Query: 1157 cacacagagcataaacactaataccgtagccaacaaaaaaacaatcacaatacccaccca 1216
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 554 cacacagagcataaacactaataccgtagcaaacaaaaaaacaatcacaatacccaccca 613
Query: 1217 aatagatccaaatgtgataataaatgtcagtcagaatgacaaaaccactcagaacaaagc 1276
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 614 aatagatccaaatgtgataataaatgtcagccagaatgacaaaaccactcagaacaaagc 673
Query: 1277 tccgactaaatctgacgagatttcaaagatctcgtcgagctcgtcggtcgggc 1329
|||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 674 tccgactaaatctgacgagattacaaagatctcgttgagctcgtcggtcgggc 726
>BF01013B2D09
Length = 846
Score = 206 bits (104), Expect = 2e-52
Identities = 126/134 (94%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 24 ttttttttagtat--atatatatatatatatatgtacatgagaatcttctgacaccagag 81
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ttttttttagtatttatatatatatatatatatgtacatgagaatcttctgacaccagnn 772
Query: 82 aatttgatttgtatgtctgttgatgttgtttataaattttgttttagaaatttgttgtat 141
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 773 natttgatttgtatgtctgttgatgttgtttataaattttgnnttaaaaatttgttgtat 832
Query: 142 tttgccaaaaatta 155
||||||||||||||
Sbjct: 833 tttgccaaaaatta 846
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 486,444
Number of extensions: 17422
Number of successful extensions: 17422
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 17415
Number of HSP's successfully gapped: 3
Length of query: 3934
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3916
Effective length of database: 8,109,745
Effective search space: 31757761420
Effective search space used: 31757761420
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)