BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20269 (UTR included)
(3106 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1619_C1 1744 0.0
BF01015B2G08 696 0.0
BF01042B1G02 609 e-173
BF01003X1A10 92 6e-18
>BF14_1619_C1
Length = 928
Score = 1744 bits (880), Expect = 0.0
Identities = 916/928 (98%)
Strand = Plus / Plus
Query: 282 aaactaaaatgtcataacattggagattaaataatttctagtgagagttaatcacgaatt 341
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaactaaaatgtcataacattggagattaaataatttctagtgagagttaatcacgaatc 60
Query: 342 aacgataaatgaatgaaactgcagaattggcatgttatgagaataaaaaatacaatattt 401
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 61 aacgataaatgaatgaaactgcggcattggcatgttatgagaataaaaaatacaatattt 120
Query: 402 ttaattcatctatagtgttgaatacttgttgtggtgcaagatattatattgatagtaaat 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaattcatctatagtgttgaatacttgttgtggtgcaagatattatattgatagtaaat 180
Query: 462 tttagtttaaaagtgaataagttctataaagtagtaataatgtatgcggttgaaaagaaa 521
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 tttagtttaaaagtgaataagttctataaagtagtaataatgtatgctgttgaaaagaaa 240
Query: 522 tttgaaatagaaatgaaattaaaacgagaaatgacgaatatccaggagctaaaggcggca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgaaatagaaatgaaattaaaacgagaaatgacgaatatccaggagctaaaggcggca 300
Query: 582 gcaaatagaagctcttcgcttgctagcgatgtctgtaatgttctgggtgcgtgtgagcaa 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaaatagaagctcttcgcttgctagcgatgtctgtaatgttctgggtgcgtgtgagcaa 360
Query: 642 cgcctgcaacagttagagactgctgtcttgccactgtacggagacacagcaagactgcag 701
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 cgcctgcaacagctagagactgctgtcttgccactgtacggagacacagcgagactgcaa 420
Query: 702 caaatacaccataatatggagagcacagtgacagctctggaccatgttataaactactac 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaatacaccataatatggagagcacagtgacagctctggaccatgttataaactactac 480
Query: 762 atggtgtcccgagagctggctgacctcatacaggccgggcctcacaccgggactacagag 821
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 481 atggtgtcccgagagctggctgacctcatacaggccgggcctcataccgggactacagag 540
Query: 822 tcgttgaatatctatttagaggctctcgataaattggccgaggctcagaactatttcaat 881
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 541 tcgttgaatatctatttagaggctctggataaattggcagaggctcagaactatttcaat 600
Query: 882 aaaaataacccacaaagtgttgaattggaaaatattaaccagctatacaatacaggagtc 941
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaaataacccacaaagtgttgaattggaaaatattaaccagctatacaatacaggagtt 660
Query: 942 ataaagctggaaggtgcttttgaggaactgctcagtcgtaacactcggccgctttctccc 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ataaagctggaaggtgcttttgaggaactgctcagtcgtaacactcggccgctttctccc 720
Query: 1002 actacacttatggatatgattgctctagaagaggattcaagtgtggacagtgtgagtgtg 1061
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actacacttatggatatgatcgctctagaagaggattcaagtgtggacagtgtgagtgtg 780
Query: 1062 agcgggaactccgccactaacacggccgtggagagcatgcgcagtgcggcggcctggctg 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agcgggaactccgccactaacacggccgtggagagcatgcgcagtgcggcggcctggctg 840
Query: 1122 agtgccgcggggcgcgcgccctccgcccccctgctagcggttagggctccggccgcgctc 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agtgccgcggggcgcgcgccctccgcccccctgctagcggttagggctccggccgcgctc 900
Query: 1182 aactcactgatagcattcaaggactact 1209
||||||||||||||||||||||||||||
Sbjct: 901 aactcactgatagcattcaaggactact 928
>BF01015B2G08
Length = 431
Score = 696 bits (351), Expect = 0.0
Identities = 407/431 (94%)
Strand = Plus / Plus
Query: 331 aatcacgaattaacgataaatgaatgaaactgcagaattggcatgttatgagaataaaaa 390
||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 aatcacgaaccaacgataaatgaatgaaactgcggcattggcatgttatgagaataaaaa 60
Query: 391 atacaatatttttaattcatctatagtgttgaatacttgttgtggtgcaagatattatat 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacaatatttttaattcatctatagtgttgaatacttgttgtggtgcaagatattatat 120
Query: 451 tgatagtaaattttagtttaaaagtgaataagttctataaagtagtaataatgtatgcgg 510
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 121 tgatagtaaattttagtttaaaagcgaataagttctataaagtagtaataatgtatgctg 180
Query: 511 ttgaaaagaaatttgaaatagaaatgaaattaaaacgagaaatgacgaatatccaggagc 570
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 ttgaaaagaaatttgaaatagaaatgaaattaaaactagaaatgacgaatatccaggagc 240
Query: 571 taaaggcggcagcaaatagaagctcttcgcttgctagcgatgtctgtaatgttctgggtg 630
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaggcggcagcaaatngaagctcttcgcttgctagcgatgtctgtaatgttctgggtg 300
Query: 631 cgtgtgagcaacgcctgcaacagttagagactgctgtcttgccactgtacggagacacag 690
|| |||||||||||||||||||||||||||||||| ||| ||||||||| | ||
Sbjct: 301 cgagtgagcaacgcctgcaacagttagagactgctnnnttgnnnctgtacggannnanag 360
Query: 691 caagactgcagcaaatacaccataatatggagagcacagtgacagctctggaccatgtta 750
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagactnnnnnaaatacaccataatatggagagcacagtgacagctctggaccatgtta 420
Query: 751 taaactactac 761
|||||||||||
Sbjct: 421 taaactactac 431
>BF01042B1G02
Length = 451
Score = 609 bits (307), Expect = e-173
Identities = 325/331 (98%)
Strand = Plus / Plus
Query: 384 ataaaaaatacaatatttttaattcatctatagtgttgaatacttgttgtggtgcaagat 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaaaatacaatatttttaattcatctatagtgttgaatacttgttgtggtgcaagat 60
Query: 444 attatattgatagtaaattttagtttaaaagtgaataagttctataaagtagtaataatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatattgatagtaaattttagtttaaaagtgaataagttctataaagtagtaataatg 120
Query: 504 tatgcggttgaaaagaaatttgaaatagaaatgaaattaaaacgagaaatgacgaatatc 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatgctgttgaaaagaaatttgaaatagaaatgaaattaaaacgagaaatgacgaatatc 180
Query: 564 caggagctaaaggcggcagcaaatagaagctcttcgcttgctagcgatgtctgtaatgtt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggagctaaaggcggcagcaaatagaagctcttcgcttgctagcgatgtctgtaatgtt 240
Query: 624 ctgggtgcgtgtgagcaacgcctgcaacagttagagactgctgtcttgccactgtacgga 683
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 ctgggtgcgtgtgatcaacgcctgcaacagctagagactgctgtcttgccactgtacgga 300
Query: 684 gacacagcaagactgcagcaaatacaccata 714
|||||| | |||||||| |||||||||||||
Sbjct: 301 gacacaacgagactgcaacaaatacaccata 331
Score = 139 bits (70), Expect = 3e-32
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 715 atatggagagcacagtgacagctctggaccatgttataaactactacatggtgtcccgag 774
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 374 atatggagagcacagtgacagctctggaccatgttataaactactacatggcgtcccgag 433
Query: 775 agctggctgacctcatac 792
|||||||||| |||||||
Sbjct: 434 agctggctgatctcatac 451
>BF01003X1A10
Length = 346
Score = 91.7 bits (46), Expect = 6e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 1919 cgccctcacctactgtcacgcgctggccgctcatgttcacgtcataggtc 1968
||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 346 cgccctcacctactgtcacgcgctggccgctcacgttcacgtcataggtc 297
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,745
Number of extensions: 6108
Number of successful extensions: 6108
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6108
Number of HSP's successfully gapped: 5
Length of query: 3106
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3088
Effective length of database: 8,109,745
Effective search space: 25042892560
Effective search space used: 25042892560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)