BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20272 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2E07 1485 0.0
BF01050A1A06 72 4e-12
>BF01044A2E07
Length = 777
Score = 1485 bits (749), Expect = 0.0
Identities = 770/777 (99%)
Strand = Plus / Plus
Query: 790 attcaccagttacagcggaatcacccatgtttggtttagattgtgaaatgtgtcttacaa 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcaccagttacagcggaatcacccatgtttggtttagattgtgaaatgtgtcttacaa 60
Query: 850 aagctggttcagagttaacccgagtatcaatcgtcaatgaaaaacacgaaactgtatatg 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagctggttcagagttaacccgagtatcaatcgtcaatgaaaaacacgaaactgtatatg 120
Query: 910 aatcttttgtcaaaccctacaaccagataatggattatctaactcagtattctggtatta 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcttttgtcaaaccctacaaccagataatggattatctaactcagtattctggtatta 180
Query: 970 ctgaggagttattgagagatgtaacaaaaaggcttgaagatgtgcagaaagaaatacaag 1029
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 ctgaggagttattgagagatgtaacaaaaaggctagaagatgtgcagaaagaaatacaag 240
Query: 1030 agcttctgccctctgatgcaatattggtcggacagtctctgaattcagatttacatgcct 1089
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 agcttctgccctctgatgcaatattggtcggacagtcattgaattcagatttacatgcct 300
Query: 1090 taagattaatgcacccatatatcattgacacaagtttgatctacaatttcaccggagaaa 1149
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 301 taagattaatgcacccatatatcattgacacaagtttgatttacaatttcaccggagaaa 360
Query: 1150 gatatcgcaagccgaagttaaaaacattagcaaaggaatatctcaaagaggaaattcaga 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatatcgcaagccgaagttaaaaacattagcaaaggaatatctcaaagaggaaattcaga 420
Query: 1210 ccggcacagatggtcactgctcagtggaggattcccttgcctccctcaaacttgttcagc 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccggcacagatggtcactgctcagtggaggattcccttgcctccctcaaacttgttcagc 480
Query: 1270 tgaaattaagcaagagtgtcgaatttggtgatgcagtacacacaaagaggcaaaaataca 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaaattaagcaagagtgtcgaatttggtgatgcagtacacacaaagaggcaaaaataca 540
Query: 1330 aagaagaagtcaataaaatggtcaccgaaccccattatgctttgtccatttttaatcaca 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaagaagtcaataaaatggtcaccgaaccccattatgctttgtccatttttaatcaca 600
Query: 1390 taatagaacagaagaaaacctcagtaatcatcggctgtgacaatataacaggcgactatc 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taatagaacagaagaaaacctcagtaatcatcggctgtgacaatataacaggcgactatc 660
Query: 1450 atacatttttgacccaagcaaaggaaagtttaagtactcagttgaagaaaggtaaaccta 1509
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atacatttttgactcaagcaaaggaaagtttaagtactcagttgaagaaaggtaaaccta 720
Query: 1510 agagagttaaattgaacacagtggatagtatggatgaagtcataacaacattaacag 1566
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 721 agcgagttaaattgaacacagtggatagtatggatgaagtcataacaacgttaacag 777
>BF01050A1A06
Length = 653
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1833 catgtgcttagaatctacaaactcactctctttctatctcctactttctacgtttgtgta 1892
|||| |||| |||||||| ||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 594 catgagcttggaatctaccgactcactctctttctctctcctactttctacatttgtgta 535
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,198
Number of extensions: 4090
Number of successful extensions: 4090
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4090
Number of HSP's successfully gapped: 2
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)