BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20275 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1B02 1483 0.0
>BF01037A1B02
Length = 816
Score = 1483 bits (748), Expect = 0.0
Identities = 772/781 (98%)
Strand = Plus / Plus
Query: 1104 gctacagtacgtgctcgtactcccctgaagctctggggtctggatagagattcgtaccga 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 gctacagtacgtgctcgtactcccctgaagctctggggtctggatagagattcgtaccga 95
Query: 1164 agaatcctaatgggctccaccatcaggaagagaagaatgtatgacgagtttctctcaaga 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 agaatcctaatgggctccaccatcaggaagagaagaatgtatgacgagtttctctcaaga 155
Query: 1224 gtgtccattttagaaagcctagaaaaatgggagcgtttgactgtagcggatgcactggaa 1283
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 156 gtgtccattttagaaagcctagaaaaatgggagcgtttgactgtagcagatgcactggaa 215
Query: 1284 ccagtatcgtttaatgacggagagaccatagtacgacagggagaacctggcaatgacttc 1343
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 216 ccagtatcgtttaatgacggagagaccatagtacgacagggtgaacctggcaatgacttc 275
Query: 1344 tatatcattgtcgaaggtacagccgtggtgctgcagcagagaggaggttcgggtgatccg 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tatatcattgtcgaaggtacagccgtggtgctgcagcagagaggaggttcgggtgatccg 335
Query: 1404 gtcgaggtggggagattgggcccgtcggattacttcggggagatagcgttgttactggac 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtcgaggtggggagattgggcccgtcggattacttcggggagatagcgttgttactggac 395
Query: 1464 cgaccgcgagccgccaccgtgagggcggacggaccactcaaatgtgtcaaattagaccga 1523
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 396 cgaccgcgagccgccaccgtgagggcggacggaccacttaaatgtgtcaaattagaccga 455
Query: 1524 gccagattcgaaagggtcctgggtctttgtgccgatatcttgaagcgaaacatcgcgcag 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gccagattcgaaagggtcctgggtctttgtgccgatatcttgaagcgaaacatcgcgcag 515
Query: 1584 tacaatagtttcgtttctctgtcagtgtaacactaacctaattgataggaacgttgatac 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tacaatagtttcgtttctctgtcagtgtaacactaacctaattgataggaacgttgatac 575
Query: 1644 tgttgagttgtatgttttaattttaatacatatgttatttgttttgtgtcgcttctatgc 1703
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 576 tgttgagttgtatgttttaattttaatacatatgttatttgttttgtctcgcttctatgc 635
Query: 1704 agcgattttattattttgtgcagaattatgttaatttttttcataatgttaataatatag 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 agcgattttattattttgtgcagaattatgttaatttttttcataatgttaataatatag 695
Query: 1764 aaactttttatgcgtttattacttaaaagttgaatgtaaaataaatacttactgtcatat 1823
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 696 aaattttttatgcgtttattacttaaaagttgaatgtannntaaatacttactgtcatat 755
Query: 1824 ctctcctaacatgtcgtgtaagagatgttacatggtttttataacttaatatattattat 1883
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 756 ctctcctaacatgtcgtgtaagagatgttacatggtttttgtaacttaatatattattat 815
Query: 1884 g 1884
|
Sbjct: 816 g 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,410
Number of extensions: 7981
Number of successful extensions: 7981
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7981
Number of HSP's successfully gapped: 1
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)