BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20276 (UTR included)
(1708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2F01 1655 0.0
>BF01057B2F01
Length = 835
Score = 1655 bits (835), Expect = 0.0
Identities = 835/835 (100%)
Strand = Plus / Plus
Query: 312 aagcaacatgacagtttagtcgtttattaaatgctgttaaattttatttgaaatatagag 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcaacatgacagtttagtcgtttattaaatgctgttaaattttatttgaaatatagag 60
Query: 372 tacttatttgaaagtagtttataaacttataaaaataaaacattttaaatatggttttgt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacttatttgaaagtagtttataaacttataaaaataaaacattttaaatatggttttgt 120
Query: 432 aaaatggaatattaaaaaaaatattttcttacgccatttttaataatatcataatatgta 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaatggaatattaaaaaaaatattttcttacgccatttttaataatatcataatatgta 180
Query: 492 taaatagtgatggcgagttttcggaggatattttacaaatatgctaaatacttagctata 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaatagtgatggcgagttttcggaggatattttacaaatatgctaaatacttagctata 240
Query: 552 attgttttgacaacgttttttgctcaactcttcatatcaatattattttttccttcaatt 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgttttgacaacgttttttgctcaactcttcatatcaatattattttttccttcaatt 300
Query: 612 cacgacaatcttcttaaaagaaatggttatacatccgttgcaagaaacgaaggcggagat 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacgacaatcttcttaaaagaaatggttatacatccgttgcaagaaacgaaggcggagat 360
Query: 672 gcttcagcaagaaaacttggttctaatattagcgatgatgaagatttcggttcaaaaact 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcttcagcaagaaaacttggttctaatattagcgatgatgaagatttcggttcaaaaact 420
Query: 732 ctatcacacaacaaaccattaccgcaattgagactcgaagagttagactttaggccaagc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctatcacacaacaaaccattaccgcaattgagactcgaagagttagactttaggccaagc 480
Query: 792 tgtgatattaaaagtcgggaagcgatatcagctattcatcgagctaaaacacaaaaatgt 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtgatattaaaagtcgggaagcgatatcagctattcatcgagctaaaacacaaaaatgt 540
Query: 852 aaacaggaaatagttaataagacttgtcttatacagaatggcagcttttatcctaaaaaa 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaacaggaaatagttaataagacttgtcttatacagaatggcagcttttatcctaaaaaa 600
Query: 912 ctaccaaattattgcagttccaagaccatgaaatatggacgtcacttaggttgttttgta 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctaccaaattattgcagttccaagaccatgaaatatggacgtcacttaggttgttttgta 660
Query: 972 gatgaaaagaaattaaggttgttgtcaggattttatggaagttatgctaatgctaattct 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatgaaaagaaattaaggttgttgtcaggattttatggaagttatgctaatgctaattct 720
Query: 1032 ccgacattttgcctagatatctgtgttcaggctggttttctttatggtggagtacaatat 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgacattttgcctagatatctgtgttcaggctggttttctttatggtggagtacaatat 780
Query: 1092 gcttctgagtgtttctgtggtgataccactcccactgcatcatcacttactgctg 1146
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcttctgagtgtttctgtggtgataccactcccactgcatcatcacttactgctg 835
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,470
Number of extensions: 7430
Number of successful extensions: 7430
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7430
Number of HSP's successfully gapped: 1
Length of query: 1708
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1691
Effective length of database: 8,119,229
Effective search space: 13729616239
Effective search space used: 13729616239
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)