BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20281 (UTR included)
(1726 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A2G02 1086 0.0
>BF01025A2G02
Length = 610
Score = 1086 bits (548), Expect = 0.0
Identities = 574/582 (98%), Gaps = 3/582 (0%)
Strand = Plus / Plus
Query: 463 aaataaatttggattgcttcaataatactctttaagttatggaaaaagaaaatgcagaac 522
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 aaataaatttggattgcttcaataatactctttaagttatggaaaaagaaaatacagaac 60
Query: 523 cagattgtgctatttgcctgcaaaaacttcatcaccctacacagctaccttgtggtcatg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagattgtgctatttgcctgcaaaaacttcatcaccctacacagctaccttgtggtcatg 120
Query: 583 tattttgttttctttgtgtaaagggtattgcaatacagagtaagaaatgtgccatgtgtc 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattttgttttctttgtgtaaagggtattgcaatacagagtaagaaatgtgccatgtgtc 180
Query: 643 gaactcatatcccaagggattattttgatcatccaattttgttagagaaacagccattgg 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaactcatatcccaagggattattttgatcatccaattttgttagagaaacagccattgg 240
Query: 703 atgaagttgatgaagattgtgataataataaacatcagtggtattatgagggtagaaacg 762
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 atgaaattgatgaagattgtgataa---taaacatcagtggtattatgagggtagaaacg 297
Query: 763 gttggtggaaatatgaagaaaggagcaatgctgatttagaagctgctttcacatcggggg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gttggtggaaatatgaagaaaggagcaatgctgatttagaagctgctttcacatcggggg 357
Query: 823 tcagcgagtgtctattgctactggccggtaccatttactgtgtggattttcaaaacatgg 882
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 358 tcagtgagtgtctattgctactggccggtaccatttactgtgtggattttcaaatcatgg 417
Query: 883 ttcaaataagaagaagtgatccaacaaaattgagacgagtgaaacgagatataccaacat 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttcaaataagaagaagtgatccaacaaaattgagacgagtgaaacgagatataccaacat 477
Query: 943 ttccctctaaaggtattgccggcattaaaagacttgatccacaacaagaaactggccaaa 1002
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 478 ttccctctaaaggtattgccggcattaaaagacttgatccacaacaagaaagtggccaaa 537
Query: 1003 ctgggcaggatgtaagagatgaaaatactaacagtctacagg 1044
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctgggcaggatgtaagagatgaaaatactaacagtctacagg 579
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,337
Number of extensions: 5427
Number of successful extensions: 5427
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5426
Number of HSP's successfully gapped: 1
Length of query: 1726
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1709
Effective length of database: 8,119,229
Effective search space: 13875762361
Effective search space used: 13875762361
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)