BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20286 (UTR included)
(3013 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A2B11 819 0.0
>BF01018A2B11
Length = 721
Score = 819 bits (413), Expect = 0.0
Identities = 419/421 (99%)
Strand = Plus / Plus
Query: 2593 atatttttataatataattctgaagatgtttctgtaatttcttgtagtaatttaattcat 2652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 atatttttataatataattctgaagatgtttctgtaatttcttgtagtaatttaattcat 91
Query: 2653 tgttatgataataattgtatttttcttatttgttacattcctaatgtagatattttctaa 2712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tgttatgataataattgtatttttcttatttgttacattcctaatgtagatattttctaa 151
Query: 2713 atgtgggatatatgtttctatgtgcaataaaaaagtgtatgctagggaggcttgttcctg 2772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgtgggatatatgtttctatgtgcaataaaaaagtgtatgctagggaggcttgttcctg 211
Query: 2773 ttatgaagtaactgttgttcaaacaacaaaacttcgttttaattcatatgttcatgtgtt 2832
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttgtgaagtaactgttgttcaaacaacaaaacttcgttttaattcatatgttcatgtgtt 271
Query: 2833 tttgaaacaatttgcttgtattattattatagtgcaaataggaataaaatagaagtgtta 2892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tttgaaacaatttgcttgtattattattatagtgcaaataggaataaaatagaagtgtta 331
Query: 2893 tgcaccaagctttttaacatataacaacaccaagtgatctaaatataatttccaacagtg 2952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgcaccaagctttttaacatataacaacaccaagtgatctaaatataatttccaacagtg 391
Query: 2953 ttaaaaggtaataaagtttttggaactaacatgaaaaaattttacaaggaaatggcctaa 3012
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttaaaaggtaataaagtttgtggaactaacatgaaaaaattttacaaggaaatggcctaa 451
Query: 3013 t 3013
|
Sbjct: 452 t 452
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 407,626
Number of extensions: 9367
Number of successful extensions: 9367
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9367
Number of HSP's successfully gapped: 1
Length of query: 3013
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2995
Effective length of database: 8,109,745
Effective search space: 24288686275
Effective search space used: 24288686275
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)