BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20295 (UTR included)
(2734 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B1F04 1039 0.0
BF01002X1D05 668 0.0
BF01034B1A03 412 e-114
>BF01039B1F04
Length = 731
Score = 1039 bits (524), Expect = 0.0
Identities = 564/580 (97%)
Strand = Plus / Plus
Query: 535 aaaagccatctaaaaggcaacctgctaggctaaggtataaaattgaaaagaaagtcagag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aaaagccatctaaaaggcaacctgctaggctaaggtataaaattgaaaagaaagtcagag 211
Query: 595 atcacaacaggaaagtaaagaaagaggcaaaaaagaaccctaaatctaagaagcctaaag 654
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 212 atcacaacaggaaagtaaagaaagaggcaaaaaagaaccctaaatctaaaaagcctaaag 271
Query: 655 ctgtacaaatacctaacgtatgtccatttaaagaggaaatattgaaagaagtagaacttg 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctgtacaaatacctaacgtatgtccatttaaagaggaaatattgaaagaagtagaacttg 331
Query: 715 ttaaaaagcataaagaagaagaaaaacagaagagaagagagcaagcgaagttagacaaac 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttaaaaagcataaagaagaagaaaaacagaagagaagagagcaagcgaagttagacaaac 391
Query: 775 agaagaaacttgaagagaagaagaatcctgtgggtatggacactctggttgcgaatgcag 834
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 392 agaagaaacttgaagagaagaagaatcctgtgggtatcgacactctggttgcaaatgcag 451
Query: 835 aagccagaggtaaagttcacgatgcgttcaaaggcaatgaaaatggtaatacagaatata 894
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aagccagaggaaaagttcacgatgcgttcaaaggcaatgaaaatggtaatacagaatata 511
Query: 895 gcaaggacagacaacaggagaattcattaaaaacttattacagagaattcaagaaggtta 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gcaaggacagacaacaggagaattcattaaaaacttattacagagaattcaagaaggtta 571
Query: 955 tatcagaagccgaagtcattcttgaagttgtcgacgctagagatccattaggtacaagat 1014
|||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 572 tatcagaagccgaagtcattcttgaagtcgttgatgctagagatccattaggtacaagat 631
Query: 1015 gtacacaagttgaggaagctgtccgtgaatcagggaagagattagtgttagtactcaaca 1074
|||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 632 gtacacaagttgaggaagctgtccgtgaatcagggangnnannagtgttagtactcaaca 691
Query: 1075 aggcagacctagtgccacgggacaacctgacagcctggct 1114
|||||| ||||||||||||||||||||||||| |||||
Sbjct: 692 aggcagnnntagtgccacgggacaacctgacagcttggct 731
>BF01002X1D05
Length = 383
Score = 668 bits (337), Expect = 0.0
Identities = 349/353 (98%)
Strand = Plus / Plus
Query: 1757 cacggagccacctgaagtggaatctgaagtccatgttgaagcaaagatagttaacagcct 1816
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13 cacggagccacctgaagtggaatctgaagtccgtgttgaagcaaagatagttaacagcct 72
Query: 1817 cgctcaggagtttgacatcaacagctttgaggccatggagacggaggcgattgatgctct 1876
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 73 cgctcaggagttcgacatcaacagctttgaggccatggagacggaggcgattgatgcact 132
Query: 1877 tgggaacaatgatggtgacgccatcaagatagcgagcactggacccgtgacggcggcggc 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tgggaacaatgatggtgacgccatcaagatagcgagcactggacccgtgacggcggcggc 192
Query: 1937 cgaacacgaaatgcaagtagacgaagacgaatccagcctcttacctaaaacgctgaacat 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cgaacacgaaatgcaagtagacgaagacgaatccagcctcttacctaaaacgctgaacat 252
Query: 1997 caggtcaaaattggacaagagcaagaaaacgaacgaaaaaactaaaaccgatcccgaaat 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caggtcaaaattggacaagagcaagaaaacgaacgaaaaaactaaaaccgatcccgaaat 312
Query: 2057 gctcatagaggggaacaccaaacagaataaattaagaaagatgcagttcaaaa 2109
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 313 gctcatagaggggaacactaaacagaataaattaagaaagatgcagttcaaaa 365
>BF01034B1A03
Length = 764
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Minus
Query: 1 ggtgctcgaggtggaaccacgactggcttctgtggttccgcgagcaatggccggcgagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggtgctcgaggtggaaccacgactggcttctgtggttccgcgagcaatggccggcgagct 160
Query: 61 gacaggttcgcgttcctgttaaacatgataccctctaagctaggagacattggcactgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gacaggttcgcgttcctgttaaacatgataccctctaagctaggagacattggcactgtc 100
Query: 121 acgatctgctgaatagaggattattgaagcgtgcgttcgcgcacataactcgcagccgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 acgatctgctgaatagaggattattgaagcgtgcgttcgcgcacataactcgcagccgga 40
Query: 181 ctatgaacgtttacgtgaaagtattatc 208
||||||||||||||||||||||||||||
Sbjct: 39 ctatgaacgtttacgtgaaagtattatc 12
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 321,603
Number of extensions: 10441
Number of successful extensions: 10441
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 10441
Number of HSP's successfully gapped: 3
Length of query: 2734
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2717
Effective length of database: 8,119,229
Effective search space: 22059945193
Effective search space used: 22059945193
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)