BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20313 (UTR included)
(2109 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A2E08 771 0.0
BF01025A2C05 101 4e-21
>BF01053A2E08
Length = 783
Score = 771 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Minus
Query: 1525 cagaccagaagcaaccaccccaatcccccagcaagcagtccacgggcgggggggactcac 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cagaccagaagcaaccaccccaatcccccagcaagcagtccacgggcgggggggactcac 330
Query: 1585 agcctacgatactgtggcagtgtaacttgtaaaccgaacccccgacacgacatccgacac 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agcctacgatactgtggcagtgtaacttgtaaaccgaacccccgacacgacatccgacac 270
Query: 1645 gacacccgacacaccttacacattaaaacaccccgtaagccacactaaaaaccaaaacca 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gacacccgacacaccttacacattaaaacaccccgtaagccacactaaaaaccaaaacca 210
Query: 1705 cgcttctgctgaggcaggcttcgaaatttaaattttagtgcattcaataccgcttcgctt 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cgcttctgctgaggcaggcttcgaaatttaaattttagtgcattcaataccgcttcgctt 150
Query: 1765 ccgcagttacgttgcatcagcctcacagaaacgtggtcgcaaacatcattcactttaacg 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ccgcagttacgttgcatcagcctcacagaaacgtggtcgcaaacatcattcactttaacg 90
Query: 1825 gtgtgttttcatcccgttttattcagttcggttattttcattaaatattaacgcacatat 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gtgtgttttcatcccgttttattcagttcggttattttcattaaatattaacgcacatat 30
Query: 1885 gtgctacataaatgcgtttagtcatcggt 1913
|||||||||||||||||||||||||||||
Sbjct: 29 gtgctacataaatgcgtttagtcatcggt 1
>BF01025A2C05
Length = 801
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 2059 acctgacaatatttatcggccggcaaaccgactccgtacgcttgtctgatg 2109
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctgacaatatttatcggccggcaaaccgactccgtacgcttgtctgatg 51
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 155,182
Number of extensions: 2435
Number of successful extensions: 2435
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2433
Number of HSP's successfully gapped: 2
Length of query: 2109
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2092
Effective length of database: 8,119,229
Effective search space: 16985427068
Effective search space used: 16985427068
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)